Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1055 |
Symbol | |
ID | 4603307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1276475 |
End bp | 1277728 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639780402 |
Product | sodium:dicarboxylate symporter |
Protein accession | YP_926932 |
Protein GI | 119774192 |
COG category | [C] Energy production and conversion |
COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.637343 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATAATTC AAACATTAAA TAAAATTCCC TTCTGGCAGA AAGTGCTGGC TGGTTTTGCC CTGGGGATAC TCACAGGGGT ACTGCTGGGC GAATCGGCCA CTGTGCTCAA GCCCCTTGGC GATCTCTTTA TTGCCGCTAT CAAGATGCTG GTTGCACCAC TGGTCCTGTG CGCCATCGTG GTCAGTATCA CCTCCCTGGG CAGCTCATCC AACCTTAAGC GCCTGAGCTT CAAGACACTG GCGCTCTTCA TGCTGACCGG TACCCTTGCC TCGTTGATTG GTCTGGCAGT CGGCAGCAGC TTCGATATGG GCGGCAGCAT GCAACTGGCC AGTACCGAAG TGCGCGAACG CGTTGTACCG GGCTTTGCTC AGGTGCTGCT GGATATGATC CCGGTGAACC CCTTTGCCTC GCTGACCAAC GGCAAAGTAC TGCAAATCAT TGTATTTGCG GCCTTGGTGG GTATTGCCAT CAACGCTGTG GGCGAGAAAG CCGAGCCTCT GAAAAAGGTA TTTGATGCCG GAGCCGAGGT GATGTTCCAG CTGACCCGTA TGGTGCTGAA ACTCACTCCA ATCGGTGTAT TTGGCCTGAT GGCTTGGGTG GTGGGCGAAT ATGGCCTCTC AACCCTGCTG CCGCTGGGTA AATTTATTAT CGCCATCTAC GTGGCAGCGC TTATCCACAT AGTGTTTGTC TACGGCGGCC TGGTGAAGTT TGCTGCCCGC TTAAGCCCTC TGCAGTTTTT CCGTAAGGCA ATGCCAGCGC AGCTGGTTGC CTTTAGCACG GCGTCGAGCT TTGGCACCCT GCCGGTCACC ACCAAGTGTG CCGAGTCCAT GGGTGTTTCC AAGCGTTACA GTGCGTTTGT GCTGCCCATG GGCGCCACCA TGAACATGGA TGGCTGTGGT GGTATTTATC CTGCCATTGC GGCCATTTTC ATCGCGCAAA TCTACGGAAT TCCGCTGGAT ATGACCGACT ATATGCTGAT TGCCGTTACC GCGACCGTGG CCTCAGTGGG CACCGCCGGC GTACCAGGCA GCGCCATGGT GATGCTTACC GTCACCCTGG GAGTGGTTGG TTTACCGCTG GAAGGTATTG CCTTTATCGC GGCCATTGAC CGGGTGATTG ATATGATACG GACCTGCACC AACGTTACCG GCGATATGAT GACCGCCGTA GTGGTGGGCA ATTCCGAGGG TGAGCTGGAC CGCGAGCGAT TTTATAAGGC GGAAGAAGAT AAAATCGTCG CAGACAACGC CTGA
|
Protein sequence | MIIQTLNKIP FWQKVLAGFA LGILTGVLLG ESATVLKPLG DLFIAAIKML VAPLVLCAIV VSITSLGSSS NLKRLSFKTL ALFMLTGTLA SLIGLAVGSS FDMGGSMQLA STEVRERVVP GFAQVLLDMI PVNPFASLTN GKVLQIIVFA ALVGIAINAV GEKAEPLKKV FDAGAEVMFQ LTRMVLKLTP IGVFGLMAWV VGEYGLSTLL PLGKFIIAIY VAALIHIVFV YGGLVKFAAR LSPLQFFRKA MPAQLVAFST ASSFGTLPVT TKCAESMGVS KRYSAFVLPM GATMNMDGCG GIYPAIAAIF IAQIYGIPLD MTDYMLIAVT ATVASVGTAG VPGSAMVMLT VTLGVVGLPL EGIAFIAAID RVIDMIRTCT NVTGDMMTAV VVGNSEGELD RERFYKAEED KIVADNA
|
| |