| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1045 |
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| Symbol | |
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| ID | 4603297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1262651 |
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| End bp | 1265215 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780384 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_926922 |
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| Protein GI | 119774182 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.493253 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGCA CAGACCTGCT TGATCTCGAA AAACATACCC CCATGATGCG TCAATACCTG
ACCATGAAGG CAGCACACCC GGATATGTTG CTGTTTTATC GCATGGGCGA CTTTTATGAA
CTCTTTTATG ATGATGCCAA GCGTGCCTCA GAAATGCTGT CCATCTCACT GACCGCACGT
GGCAAAAGCG GCGGGGATCC CATTCCCATG GCAGGTATCC CCTATCATGC GGTGGAAGGC
TATCTGGCCA AGTTGGTGCA ACTTGGGCAA TCCGTTGCCA TTTGTGAGCA AATAGGCGAT
CCGGCCACCG CAAAAGGTCC GGTAGAGAGA AAAGTCGTTC GTGTTGTGAC GCCGGGTACC
CTTACCGATG AGGCCCTTCT CCAGGAACGG CAGGACAATC TGCTGGCGGC AGTTTACCAG
GGCAAGGTGG GTTATGGTTT TGCCACTCTG GATGTAGCAT CCGGCCGCTT TGTGATTGCC
GAATTGCCAA GCCGTGAAGC GCTGGAAGCC GAGCTGCAGC GAACCAGTCC AGCCGAGCTG
TTATACAGTG AAGACTTCGG CGATATGGGG CTGATTAATC ATATCAGGGG AAAGCGACGC
CGCCCCGAGT GGGAGTTTGA CTACGATACC TGCATCAAGA TGTTGCTTGA GCAGTTCGGC
ACCCGCGACT TGCGCGGCTT TGGCATTGCC GATGCCCGTC TGTCGCTGCA GGCGGCCGGC
TGTTTGATGC AATATGTGAA AGATACCCAG CGCACTGCCC TGCCCCATAT CAATTCCATC
GTACGCTTCA ATCAGGGAGA CAGCATCATT CTGGATGCCG CCACCCGACG TAATCTGGAG
CTTACTGTCA GCCTGTCAGG TTCCCGCGAG AACACCCTTG CCAGCGTACT GGATAATACC
GTCACCGCCA TGGGCAGTCG TATGCTGCAG CGCTGGATCC ACCAGCCATT GCGCTGTCAC
GATACAATTC GGGGTCGCCA GCAGGCGGTC CAGGAATTAT TGGAGACCGG CCTTTACGAG
GACCTTCGCG CAGAGCTTAA AGCCCTGGGG GATATAGAGC GTATTCTGGC GCGTCTAGCT
CTTCGAAGCG CCCGCCCGAG AGACTTTGCC AGATTAAGGG ATGCCCTCGG GATTCTGCCG
CTTATCCGTG AGCGACTACA GCGGTGTGAC GCGCGACATC TGAAGTCACT CAATATTCTT
CTGGGTGACT TTCCCGAAGA GTATGAGCTG CTGTGCCGTG CAATAGTCGA TAACCCACCG
GTACTCATCC GTGATGGCGG TGTCATTCGC GAAGGCTATG ACAGCGAACT CGATGAATGG
CGCAAGCTCA GTGATGGTGG CATAGATTAT CTGGAGCAGA TGGAGCTGCG CGAAAAAGAG
CGCACCGGTA TTGCCACACT CAAAGTCGGC TTTAACCGGG TACATGGCTA CTACATTGAA
GTCAGCCGCG CCCAATCGGC ACTGGTGCCC ATCGCCTATC AGCGCCGCCA GACCCTTAAA
AACACTGAGC GCTATATCAC CCCGGAGCTG AAAGAATACG AAGAGAAAGT GCTGTCCAGT
CAGGGTAAGG CACTGGCGCT TGAAAAACAG CTTTGGGAAG AGCTGTTTGA TTTGATACTG
CCCAAGCTGC AGGAATTGCA GGACTTTGCC CTCGCCGCCT CCGAACTCGA CGTGCTGGCA
AACTTCGCCG ATAGGGCCGA TCTCTTCAAT TATCACTGTC CCGAGCTCAG CGACACCACA
GGCATCTTGA TTGAAGCGGG TCGTCACCCT GTGGTTGAGC GGGTCAGCCA AAGCCCCTTC
ATCCCTAACC CGGTGGAACT ATCCAATCAC CGCCGCATGT TGATTGTGAC CGGCCCCAAC
ATGGGCGGTA AATCCACTTA TATGCGTCAG GTCGCTCTCA TTACCCTGAT GGCCCATATT
GGCAGTTTTG TACCCGCAGA GCGCGCTCTG ATAGGACCGG TGGACAGAAT ATTTACCCGC
ATCGGTGCCA GCGATGACCT GGCTTCCGGC CGTTCCACCT TTATGGTGGA AATGACTGAA
ACCGCCAACA TTCTGCATAA CGCGACAGCC AACAGCCTGG TGTTGATGGA TGAAATTGGC
CGCGGTACTT CGACCTATGA TGGTATGTCG CTGGCTTGGT CGGCCGCAGA ATATCTGGCA
CAAAAACTCG GTGCCATGAC CTTATTTGCC ACCCACTATT TTGAGTTGAC CCAACTGCCG
GAGATGCTCC CCGGGGTGCA CAATGTGCAT CTGGATGCGA TTGAACATGA TGACACTATC
GCCTTTATGC ACGCAGTACA GGAAGGCGCC GCCAGTAAGA GCTATGGGTT GCAGGTAGCC
GCTCTTGCAG GGGTTCCTGC AAACGTCATC AAGGCTGCCA AACACAAGCT GCTCCAACTG
GAAAGCCGCG ACCACGGCGT CGATATGAGC AAACAGCAAG CGTTGCCATT GACTATGACA
CCTGAGCCTT CCGCAGCAGA ATTACGTCTT GAAGCAATAG ATCCGAACGA TTTAAGTCCG
CGTCAGGCGC TGGAACTTCT GTTCGAGTTA AAACGTCTAC TTTAG
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| Protein sequence | MNSTDLLDLE KHTPMMRQYL TMKAAHPDML LFYRMGDFYE LFYDDAKRAS EMLSISLTAR
GKSGGDPIPM AGIPYHAVEG YLAKLVQLGQ SVAICEQIGD PATAKGPVER KVVRVVTPGT
LTDEALLQER QDNLLAAVYQ GKVGYGFATL DVASGRFVIA ELPSREALEA ELQRTSPAEL
LYSEDFGDMG LINHIRGKRR RPEWEFDYDT CIKMLLEQFG TRDLRGFGIA DARLSLQAAG
CLMQYVKDTQ RTALPHINSI VRFNQGDSII LDAATRRNLE LTVSLSGSRE NTLASVLDNT
VTAMGSRMLQ RWIHQPLRCH DTIRGRQQAV QELLETGLYE DLRAELKALG DIERILARLA
LRSARPRDFA RLRDALGILP LIRERLQRCD ARHLKSLNIL LGDFPEEYEL LCRAIVDNPP
VLIRDGGVIR EGYDSELDEW RKLSDGGIDY LEQMELREKE RTGIATLKVG FNRVHGYYIE
VSRAQSALVP IAYQRRQTLK NTERYITPEL KEYEEKVLSS QGKALALEKQ LWEELFDLIL
PKLQELQDFA LAASELDVLA NFADRADLFN YHCPELSDTT GILIEAGRHP VVERVSQSPF
IPNPVELSNH RRMLIVTGPN MGGKSTYMRQ VALITLMAHI GSFVPAERAL IGPVDRIFTR
IGASDDLASG RSTFMVEMTE TANILHNATA NSLVLMDEIG RGTSTYDGMS LAWSAAEYLA
QKLGAMTLFA THYFELTQLP EMLPGVHNVH LDAIEHDDTI AFMHAVQEGA ASKSYGLQVA
ALAGVPANVI KAAKHKLLQL ESRDHGVDMS KQQALPLTMT PEPSAAELRL EAIDPNDLSP
RQALELLFEL KRLL
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