Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1041 |
Symbol | surE |
ID | 4603293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1259170 |
End bp | 1259916 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639780380 |
Product | stationary phase survival protein SurE |
Protein accession | YP_926918 |
Protein GI | 119774178 |
COG category | [R] General function prediction only |
COG ID | [COG0496] Predicted acid phosphatase |
TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.820653 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTGC TGGTGAGTAA CGATGATGGT GTGTATGCCC CGGGTATCAA GGCGCTGGCC GAGGCATTAA AGACCATTGC TCATGTGGAT GTGGTGGCAC CGGACAGAAA CTGCTCCGCC GCCAGTAACT CGCTGACCTT GACTAATCCA TTGAGAATTA ATAGGTTAGA CAATGGTTAT ATTGCGGTTA ACGGCACGCC ATCGGACTGT GTGCATATCG CCATTCGCGA AATTTGCACC GAAGAGCCTG AGTTGGTGGT ATCGGGTATT AACGCTGGAG CGAATATGGG AGATGACACC CTGTATTCCG GCACTGTGGC TGCGGCCATG GAGGGGCGCT TTCAGGGCCT GCCAGCTATC GCTGTGTCCC TGTCGGCCCG TACCCCTGTG CACTATGATG CGGCTGCACA AATTGCACTG CGCATCGTTG AAGGATTGAA GGCACATCCA TTGCCAGCGG ACCAAATTCT TAATGTGAAC GTGCCTGATT TGCCTCTTGA GGAAATCAAG GGCATCAAGG TGACTCGTCT TGGGGCGCGT CACAGGGCCG AAGGTGTGGT AAGAACCACC GACCCTGCTG GTCGGGAAAT TTTCTGGCTC GGTCCACCGG GTGAGGAGCT GGATGCCAGC GAAGGCACCG ACTTTGGTGC CGTGGCTGAA GGCTATGTGT CCATCACGCC GTTAACCGTC GACCTGACCG CACACAGTCA ACTTAACGCA CTGGCAAACT GGATAGAAAA GATATGA
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Protein sequence | MRLLVSNDDG VYAPGIKALA EALKTIAHVD VVAPDRNCSA ASNSLTLTNP LRINRLDNGY IAVNGTPSDC VHIAIREICT EEPELVVSGI NAGANMGDDT LYSGTVAAAM EGRFQGLPAI AVSLSARTPV HYDAAAQIAL RIVEGLKAHP LPADQILNVN VPDLPLEEIK GIKVTRLGAR HRAEGVVRTT DPAGREIFWL GPPGEELDAS EGTDFGAVAE GYVSITPLTV DLTAHSQLNA LANWIEKI
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