| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1026 |
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| Symbol | |
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| ID | 4603278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1241013 |
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| End bp | 1242677 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780365 |
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| Product | recombination and repair protein |
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| Protein accession | YP_926903 |
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| Protein GI | 119774163 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0497] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTTGTC AGCTCAGCAT CAATAACTTT GCCATTGTTC GCTTTCTGGA ATTGGACTTC
CGTCCGGGTA TGACCAGTAT TACCGGTGAA ACCGGTGCCG GTAAGTCTAT CGCCATCGAT
GCCCTGGGGC TGTGCCTGGG TAACCGCGCC GACGCCGGTG CCGTGCGCCC CGGAGCCAGC
AAAACCGAGG TCAGCGCCCG TTTCTCTCTG GATGATGTGC CACTGGCCCG GCGCTGGCTG
GAGGACAACG ATCTCGAGCT GGACGACGAA TGTATTCTCA GGCGTACCAT CACTTCCGAT
GGCCGTTCAC GGGCCTACAT CAATGGCAAT CCTGTCCCCC TCTCTCAGCT CAAATCCCTC
GGGCAATATC TGGTGGGGAT CCACGGCCAG CATGCACACC ACGCTCTCTT AAAAAACGAA
CACCAACTGA CGCTGCTGGA TAGCTATGCC AATCACCGCA TGCTGCAGGA GTCGGTCGCC
AGCGCCTATC AGCGCTGTCG TCAGATCGAA GCCGAATTAA GGCAGCTTGA GCAAAGCCAG
CAGGAACGCA TCGCCCGCAA ACAGCTGCTG CAGTATCAGG TTGAAGAATT GGACGAATTC
GCCCTGATGG AAGGAGAGTT TGAACAAATC GAGGCCGAAC ACAAACGCCT CGCCAATGGC
ACCGCACTGA TTGAAGATTG TCAGCACACC TTGTCGCTGC TCAGTGAATC CGACGAAGGC
AATATTGAGT CGCTGTTAAA CCGAGCCTTA TCCCTGGCCG CAACCCTGGA GTCGCTTGAC
CCTACCCTGG CCCCCATTGG GAATATGCTC AATGACGCCC TTATTCAGGT GCAGGAAAGC
AGCAGCGAAC TTGGCCGTTA CCTGTCCAAT CTGGAGCTGG ACCCGGAACA TTTTGCCTAT
CTCGAAGAGC GACTCTCCAA AGCCATGACC CTGGCACGAA AACACCATGT TGCCGCCGAT
AAACTGGCTG CGCATCATCA GGAGCTTGCC AGGGAACTGG CCGGATTGGA TTCCGATGAG
GCGCAGCTGG ATGAACTGAA GCAACAGGTG CAAACCAGCA GGGAGGCTTA TCTCAGTCAC
GCGCAGAAGC TCAGTCAAAG CCGTCTTCGC TATGCCAAAG AACTGGATAA GCAGGTCACC
GCCTCCATTC AGGAGCTCAA CATGCCAAAA GGTAAGTTCA CCATCGAGGT GAACTTCAAC
GACAAGGTGA TGAGTGCAAA CGGCAGTGAC AGTGTGGAGT TTTTGGTTAC CACCAACCCA
GGCCAGCCCC TGTCGCCATT GGCCAAGGTT GCCTCGGGCG GTGAACTGAG CCGCATTGGA
CTGGGTATTC AGGTGATCAC CGCGAAAAAG GTCTCGACAC CCACACTGAT TTTTGACGAA
GTGGATGTGG GGATTTCCGG CCCAACTGCG GCCGTGGTTG GCCGTATGCT CCGTGCCCTC
GGTGAGGCAA CTCAGGTGTT TTGTGTCACC CACTTGCCCC AGGTTGCCGG TAATGGCCAT
CAACATATGT TTGTGAACAA ATCCACTAAG GGTGGACAAA CAGAAACCTC GATGAAGCCA
CTGGACAAAG ACGCCCGGAT ACAGGAACTG GCTCGCTTGC TGGGCGGCGA TACCATTACC
GAAAATACTC TCGCCAATGC CCGCGAGCTG CTGCAAGGAA CGTAA
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| Protein sequence | MLCQLSINNF AIVRFLELDF RPGMTSITGE TGAGKSIAID ALGLCLGNRA DAGAVRPGAS
KTEVSARFSL DDVPLARRWL EDNDLELDDE CILRRTITSD GRSRAYINGN PVPLSQLKSL
GQYLVGIHGQ HAHHALLKNE HQLTLLDSYA NHRMLQESVA SAYQRCRQIE AELRQLEQSQ
QERIARKQLL QYQVEELDEF ALMEGEFEQI EAEHKRLANG TALIEDCQHT LSLLSESDEG
NIESLLNRAL SLAATLESLD PTLAPIGNML NDALIQVQES SSELGRYLSN LELDPEHFAY
LEERLSKAMT LARKHHVAAD KLAAHHQELA RELAGLDSDE AQLDELKQQV QTSREAYLSH
AQKLSQSRLR YAKELDKQVT ASIQELNMPK GKFTIEVNFN DKVMSANGSD SVEFLVTTNP
GQPLSPLAKV ASGGELSRIG LGIQVITAKK VSTPTLIFDE VDVGISGPTA AVVGRMLRAL
GEATQVFCVT HLPQVAGNGH QHMFVNKSTK GGQTETSMKP LDKDARIQEL ARLLGGDTIT
ENTLANAREL LQGT
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