| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1019 |
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| Symbol | ribH |
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| ID | 4603271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1234022 |
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| End bp | 1234498 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780358 |
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| Product | 6,7-dimethyl-8-ribityllumazine synthase |
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| Protein accession | YP_926896 |
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| Protein GI | 119774156 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0054] Riboflavin synthase beta-chain |
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| TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0366268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCACATAG TAGAAGGTCA TATCGAAGCC AAATCTGCCA AAGTGGCGAT TGTGGTATCA
CGTTTCAACA GTTTTGTGGT TGAGAGCCTG CTGTCAGGCG CCATCGATAC GCTCAAGCGT
TTTGGCCAGG TCAGCGAAGA CAACATCACT GTAGTGCGCG TTCCGGGCGC CTTCGAATTG
CCGCTCGCTG CCAAGAAAGT TGCTGCTTCA GGCAAGTTTG ACGGCATCAT TGCGCTGGGC
GCCGTGATCC GTGGTGGTAC TCCTCACTTT GACTTTGTTG CCGGTGAGTG CAACAAGGGA
CTGGCCCAGG TTTCCCTGGA ATTCAACACT CCAGTGTCTT TCGGTGTATT GACCACGGAT
ACCATTGAGC AAGCCATCGA GCGCTCAGGT ACCAAGGCCG GCAACAAGGG CGGCGAAGCT
GCTCTGGGCC TGCTGGAAAT GGTCAATGTA CTTAATGCTA TTGATAAAGA GCTGTAA
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| Protein sequence | MHIVEGHIEA KSAKVAIVVS RFNSFVVESL LSGAIDTLKR FGQVSEDNIT VVRVPGAFEL
PLAAKKVAAS GKFDGIIALG AVIRGGTPHF DFVAGECNKG LAQVSLEFNT PVSFGVLTTD
TIEQAIERSG TKAGNKGGEA ALGLLEMVNV LNAIDKEL
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