| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0995 |
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| Symbol | |
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| ID | 4603247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1206764 |
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| End bp | 1208317 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639780334 |
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| Product | putative methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_926872 |
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| Protein GI | 119774132 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAACA TGTCGAAACA TCGCCCTATC AACCAACGTG AAATTCGCCT CAATCAGGAT
GACGAGTTGA TTTCTACCAC AGATTTGCGT GGCGTCATCA CCTATGCCAA CCCACGCTTT
ATTCAGATAA GCGGTTATAG CAAGCAGGAA CTTGTGGGGC ACTCCCACAA TATTGTGCGT
CACCCGGATA TGCCGGCAGA CGCCTTTGCT GAACTCTGGA GCAAGCTCAA AGCCGGTCAG
TCCTGGCGCG GCCTAGTGAA AAACCGCGCC AAAGATGGCA GCTTTTATTG GGTGGATGCC
TTTGTGACGC CCATCTTTGA GGCAGGCAAA ATCGTCGGCT ATCAGTCGGT GCGCCGCATG
CCGCAGACCG AGTGGGTCAA TCGCGCCACC CGTATTTATC AGCGACTGCA ACAGGGTAAG
GGGTTGCCCC GTCACCTTTC CCTTGGGCAA AAACGCATTA TTTCCGCCCT GGTTGCCACC
ACGGGCTTAG GTATATGTGG CCTGCTGTGG GGCCCGGGCG TAATGGTGGC CGGCGCGCTC
TTGATGGGGG TCAATCTCGC CATTTTCTAC GATGAAGCGT TTCGCATTCC TGCCCGCCTG
ATGGCATTGC AACAGGAGTT CGACTCGGTC AGCCGCCACG TCTATTGCGG CTATGACACC
TCCTCTATTC TGGACTTTCA GCTGTTGCTG CAACAGGCCC GCATGCAGGG CGTGCTTGGC
CGCAGTCAGG ATCAGGCGTT GCAATTACAG CGCATCGCCG AAAACCTGGT GGTTGCCAGT
GGGCAAACCG AGGCCAGTCT CGATATGCAA CACAGGCAGT TGGAGCAACT GGCCTGCGCC
ATGGAAGAAA TGACGGCCAC CATAGGCGAA GTGGCACTCA ACAGTCGCCA GACCTCGGAG
AAAATTCGTG ACGCCCAACA GCTGTGCCAA CACAATGCCC ATGCCATGTC TGAAAAGCGT
GTCCGGATTG CCAACCTCGC AGACGCTGTG GCAGAAGCGG CCAGCAATGC CGAAAAATTA
AATCGTGAGG CCGAAAAAGT GGCCAGCGCC ATGTCTGAAA TCGATGCCAT CGCCGAGCAA
ACCAATTTAC TGGCCCTGAA TGCAGCCATT GAAGCCGCCA GAGCCGGCGA GCAGGGACGC
GGCTTTGCCG TCGTCGCCGA CGAAGTGCGC GCCCTGTCGT CCCGCACCCA GCAGTCCACC
ATGAGCATTT CGCGCAGTGT CGAGCAGATG TTCAGCATGC TGGGAAGCTG GGCCGAAGAG
ATGGGCCGCA GCCAGCAGGA GGCAGAGGCC TGTGCCCGCG CAATTGCCGA AAGCGTTGAT
GACATTCAGA ATATTCATGT GCAGATAAGT GAAATCCACG ACTTCGCCGA ACAAAACGCC
GTAGCCTCAG CCCAGCAGGA AACCGTGGTG GCAGACATGA ACCAAAACCT GCAACAAATT
GCCCACGGCG CCAATGACAA CCTGGCTGCC ATGAGTCTGG TGGGCAAAGC CACCCTGGAA
CTGCAATCCA GCGCCGATAA GGCCAGCAGC CTTCGCCAAA CCTTTGGCCA CTAA
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| Protein sequence | MSNMSKHRPI NQREIRLNQD DELISTTDLR GVITYANPRF IQISGYSKQE LVGHSHNIVR
HPDMPADAFA ELWSKLKAGQ SWRGLVKNRA KDGSFYWVDA FVTPIFEAGK IVGYQSVRRM
PQTEWVNRAT RIYQRLQQGK GLPRHLSLGQ KRIISALVAT TGLGICGLLW GPGVMVAGAL
LMGVNLAIFY DEAFRIPARL MALQQEFDSV SRHVYCGYDT SSILDFQLLL QQARMQGVLG
RSQDQALQLQ RIAENLVVAS GQTEASLDMQ HRQLEQLACA MEEMTATIGE VALNSRQTSE
KIRDAQQLCQ HNAHAMSEKR VRIANLADAV AEAASNAEKL NREAEKVASA MSEIDAIAEQ
TNLLALNAAI EAARAGEQGR GFAVVADEVR ALSSRTQQST MSISRSVEQM FSMLGSWAEE
MGRSQQEAEA CARAIAESVD DIQNIHVQIS EIHDFAEQNA VASAQQETVV ADMNQNLQQI
AHGANDNLAA MSLVGKATLE LQSSADKASS LRQTFGH
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