Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0992 |
Symbol | |
ID | 4603244 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1200226 |
End bp | 1201074 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639780331 |
Product | hypothetical protein |
Protein accession | YP_926869 |
Protein GI | 119774129 |
COG category | [S] Function unknown |
COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACACCA ATAAAGCCGC TTGTGCCACA CAGCGCCGCG GAGCACTGGG ACACTTTCGC TGCCTGTGGA TTTCGGATGT ACACCTTGGT ACACCCGACT GCCAGGCAGG TCCCCTCCTC AGCCTGCTTT CATCCTACCA TTACGACAAA CTGATCCTCG CCGGCGATAT TGTCGATCTC TGGTCGCTCA AGCGCCGCAG TTTCTGGCCC CAAAGCCACA GACAATTGCT GGAATTGCTG CTGTCTCTGG CAGAGCAAGG CACCGACATC GTTTACGTGC CAGGCAATCA CGACGAATGG TTTCGCCGCT TTCACGGCAT CAGCTTTCGC GGCATTCACA TCGAGCGCAC TCACAGACAT CACAGCCGCA CCGGACTGGA CGTACTGACC ATTCACGGCG ACGACTTCGA TGCCGAAATT GCCATAGGCC GTTTCCACGC CCGTCTCGGC GACAACCTTT ATGACCTGCT GCTGTGGCTA AACCGGGCAC TGCACCGCTG CCGGAAGTTG TTGGGCTACC CCTACTGGTC CCTGGCCGGT TACATCAAAG CCAGAGTCAG CAAGGCGCAG GCCGCCATCA GCAAGTACCG TGAAGTCGCA CTGAAACACT GCGCACGCCA GGAGGCAGAC ATGCTGGTCT GTGGCCATAT CCACCAGCCT GCGCTCATCG AACAGGGCTC ACTGATTTAT GCCAACACAG GTGACTGGGT AGAAAACACT ACCCTGATTG CCGAAACACC CCAGGGAAAC TTCCAGCTGC TCAGGTGGAA CCATGCCGAG CACCGGCTGG AGCTGGAGCA GGAAGTGCTC CTCAACAACA CAAGCAAGGC CCGCATGAAG GTTGCCTGA
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Protein sequence | MDTNKAACAT QRRGALGHFR CLWISDVHLG TPDCQAGPLL SLLSSYHYDK LILAGDIVDL WSLKRRSFWP QSHRQLLELL LSLAEQGTDI VYVPGNHDEW FRRFHGISFR GIHIERTHRH HSRTGLDVLT IHGDDFDAEI AIGRFHARLG DNLYDLLLWL NRALHRCRKL LGYPYWSLAG YIKARVSKAQ AAISKYREVA LKHCARQEAD MLVCGHIHQP ALIEQGSLIY ANTGDWVENT TLIAETPQGN FQLLRWNHAE HRLELEQEVL LNNTSKARMK VA
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