Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0972 |
Symbol | |
ID | 4603224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1175591 |
End bp | 1176400 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639780311 |
Product | hypothetical protein |
Protein accession | YP_926849 |
Protein GI | 119774109 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000604021 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000188692 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAAAACG TTAAAATGAT GGCTGTTGCC GCCGCTACTT TTGCTGCTCT GTCTACCGGT GCCGCTCAAG CTGAACAGTT CTACGGCTTC TCTAACATGT CTGTTAACTA CCTGGATTGG ACTGCCAAAG CTGAAGAGCG TTCCAATGGT GGTTACGGTG GCGCCAAAGA AGATTTCGTA TACCTCGAAA TCGAAGGCGG TGCTGGTTAC TCTTGGGGTG ACGTATACGG CTTCGTCGAT CTGGAAAACC CAGAAAACAT CAACAAGAGC GAGCGTGACT TCAGCGGTAA CCCAGTTACT GACTCTTTCC GTATCGCTGC CAAAGGTTCT ATCGCTGCCA ACATCGGTAG CAGCAACTGG AACGTTTACT CTCACCTGTA CAGCCTGACT GTTGCCGGCG AAGGTTTCTT CGACCAGAAC CTGGTTGTGG GTGTGAGCTA CGACGTGTTC ACTGATTCAG GTTTCTGGAT CAAGCCATTC CTCGGCGTAC ACTACGAAAA CCAAACCTTC GCTGGTTCAG GCTTCAACGG CTACATGGCT GGTTGGGTTC TGGGTTACAA CTTCGAACTG GGTGGCCAGA AGTTCATGGT TACCAACTGG CACGAAACTG AATTCGCCCG TGAAGACCAG TTCCGTGGCA ACGGTACCCA GTACACTCTG AAGTCTACCG GTCAGAACGG TGCAGTATCT CTGTGGTGGA ACGCCACTCA AGAGCTGACC TTCGGTCTGC AGTATCGCTA TGCTGATCAC AAGCTGGGCA CTGCTGCTTA CCACGATGCG GCTATCTTCA CTGCCAAGTA CAACTTCTAA
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Protein sequence | MKNVKMMAVA AATFAALSTG AAQAEQFYGF SNMSVNYLDW TAKAEERSNG GYGGAKEDFV YLEIEGGAGY SWGDVYGFVD LENPENINKS ERDFSGNPVT DSFRIAAKGS IAANIGSSNW NVYSHLYSLT VAGEGFFDQN LVVGVSYDVF TDSGFWIKPF LGVHYENQTF AGSGFNGYMA GWVLGYNFEL GGQKFMVTNW HETEFAREDQ FRGNGTQYTL KSTGQNGAVS LWWNATQELT FGLQYRYADH KLGTAAYHDA AIFTAKYNF
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