Gene Sama_0972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0972 
Symbol 
ID4603224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1175591 
End bp1176400 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content51% 
IMG OID639780311 
Producthypothetical protein 
Protein accessionYP_926849 
Protein GI119774109 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000604021 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000188692 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAAAACG TTAAAATGAT GGCTGTTGCC GCCGCTACTT TTGCTGCTCT GTCTACCGGT 
GCCGCTCAAG CTGAACAGTT CTACGGCTTC TCTAACATGT CTGTTAACTA CCTGGATTGG
ACTGCCAAAG CTGAAGAGCG TTCCAATGGT GGTTACGGTG GCGCCAAAGA AGATTTCGTA
TACCTCGAAA TCGAAGGCGG TGCTGGTTAC TCTTGGGGTG ACGTATACGG CTTCGTCGAT
CTGGAAAACC CAGAAAACAT CAACAAGAGC GAGCGTGACT TCAGCGGTAA CCCAGTTACT
GACTCTTTCC GTATCGCTGC CAAAGGTTCT ATCGCTGCCA ACATCGGTAG CAGCAACTGG
AACGTTTACT CTCACCTGTA CAGCCTGACT GTTGCCGGCG AAGGTTTCTT CGACCAGAAC
CTGGTTGTGG GTGTGAGCTA CGACGTGTTC ACTGATTCAG GTTTCTGGAT CAAGCCATTC
CTCGGCGTAC ACTACGAAAA CCAAACCTTC GCTGGTTCAG GCTTCAACGG CTACATGGCT
GGTTGGGTTC TGGGTTACAA CTTCGAACTG GGTGGCCAGA AGTTCATGGT TACCAACTGG
CACGAAACTG AATTCGCCCG TGAAGACCAG TTCCGTGGCA ACGGTACCCA GTACACTCTG
AAGTCTACCG GTCAGAACGG TGCAGTATCT CTGTGGTGGA ACGCCACTCA AGAGCTGACC
TTCGGTCTGC AGTATCGCTA TGCTGATCAC AAGCTGGGCA CTGCTGCTTA CCACGATGCG
GCTATCTTCA CTGCCAAGTA CAACTTCTAA
 
Protein sequence
MKNVKMMAVA AATFAALSTG AAQAEQFYGF SNMSVNYLDW TAKAEERSNG GYGGAKEDFV 
YLEIEGGAGY SWGDVYGFVD LENPENINKS ERDFSGNPVT DSFRIAAKGS IAANIGSSNW
NVYSHLYSLT VAGEGFFDQN LVVGVSYDVF TDSGFWIKPF LGVHYENQTF AGSGFNGYMA
GWVLGYNFEL GGQKFMVTNW HETEFAREDQ FRGNGTQYTL KSTGQNGAVS LWWNATQELT
FGLQYRYADH KLGTAAYHDA AIFTAKYNF