| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0971 |
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| Symbol | |
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| ID | 4603223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1174043 |
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| End bp | 1175302 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639780310 |
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| Product | nucleoside transporter |
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| Protein accession | YP_926848 |
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| Protein GI | 119774108 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000546598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000216747 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGTATAT TAATGAGCTT GGTAGGCGTT GCAGTCCTAC TTGGAATAGG TTTCCTCCTT
TCCAATAACA AAAAGGCGAT CAGTGTACGT GCCGTTGGTG GTGCGCTGGC TATTCAGGCT
GCCTTCGGTG GCTTCGTTCT GTATGTACCT TGGGGTAAAG ACATCCTGAA GACTGTGTCT
GACGGTGTAT CTGCCGTTAT CGGTTACGGT CAGAACGGTA TCAACTTCCT GTTCGGTGAT
CTGGCTCAGT TCAAAGTTGG CTTCATTTTC GCCATCAACG TGCTGCCAGT TATCATTTTC
TTCTCTTCTT TGATTGCTGT GCTTTACTAC CTGGGCATCA TGCAGTGGGT CATCCGTATC
ATCGGTGGTG GTCTGCAAAA AGCTCTCGGT ACAAGCCGTA CAGAGTCCAT GTCTGCTACT
GCGAACATCT TCGTAGGTCA GACAGAAGCG CCTCTGGTAG TACGTCCATT CATCCCAACC
ATGACTCAGT CTGAACTGTT CGCCATCATG GTGGGCGGTC TGGCTTCTAT CGCGGGTTCT
GTACTGGCCG GTTACGCCTC TATGGGCGTT AAGATTGAGT ACCTGGTAGC TGCATCATTC
ATGGCTGCTC CTGGTGGTCT GTTGATGGCC AAGCTGATGC ACCCTGAAAC TGAAAATACC
AAGAACGAAA TGGATGAGCT GCCAGAAGAT CCTGACAAGC CAGCCAACGT TCTGGACGCT
GCCGCAGCTG GTGCCTCTTC CGGTATGCAC CTGGCTCTGA ACGTAGGCGC GATGCTGATT
GCCTTCGTGG GTCTGATTGC CATGATCAAC GGTATCATCG GTGGCGTAGG TGGCTGGTTC
GGTGTTGAAG GTCTGACCCT CGAGCTGATC CTTGGTTACA TCTTCATGCC ACTGGCATTC
CTTATCGGTG TTCCATGGAA CGAAGCGTTG GTTGCCGGTT CTTTCATCGG TCAGAAGATC
GTTGTGAACG AGTTCGTTGC TTACCTGAAC TTCGCTCCTT ACCTGAAAGA CATCGCTGAC
GGCGGTATCG TGGTAGCTGA GACTGGTGCT GCTATGTCTG ACCGTACCAA GGCTATCGTG
TCCTTCGCTC TGTGTGGATT CGCTAACCTG TCTTCTATCG CTATTCTGCT GGGTGGTCTG
GGAGCGATGG CGCCTAACCG TCGCCACGAT CTGGCCAAGC TGGGTATCCG TGCCGTTATC
GCCGGTTCTC TGGCTAACCT GATGAGTGCG ACTCTGGCAG GTCTGTTCCT GGCGATTTAA
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| Protein sequence | MSILMSLVGV AVLLGIGFLL SNNKKAISVR AVGGALAIQA AFGGFVLYVP WGKDILKTVS
DGVSAVIGYG QNGINFLFGD LAQFKVGFIF AINVLPVIIF FSSLIAVLYY LGIMQWVIRI
IGGGLQKALG TSRTESMSAT ANIFVGQTEA PLVVRPFIPT MTQSELFAIM VGGLASIAGS
VLAGYASMGV KIEYLVAASF MAAPGGLLMA KLMHPETENT KNEMDELPED PDKPANVLDA
AAAGASSGMH LALNVGAMLI AFVGLIAMIN GIIGGVGGWF GVEGLTLELI LGYIFMPLAF
LIGVPWNEAL VAGSFIGQKI VVNEFVAYLN FAPYLKDIAD GGIVVAETGA AMSDRTKAIV
SFALCGFANL SSIAILLGGL GAMAPNRRHD LAKLGIRAVI AGSLANLMSA TLAGLFLAI
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