Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0949 |
Symbol | |
ID | 4605935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1150227 |
End bp | 1150772 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639780286 |
Product | cytochrome b561 |
Protein accession | YP_926826 |
Protein GI | 119774086 |
COG category | [C] Energy production and conversion |
COG ID | [COG3038] Cytochrome B561 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000303039 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.493253 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGGCGAA ATCGCGCGTC AGGTTATGGC TGGATTGCTA TTGGAATTCA CTGGATGATG GCCGTCCTGA TCCTGGGGCT CTTCGCTTTG GGGTTGTGGA TGGTGGAACT TAACTATTAC AGCCAGTGGT ACCAAGTCGC CCCATACTGG CACAAGGGCT TGGGAGGCGT TGTATTTGCC TTATTGTTAC TGAGGCTGGG GATTCGGTTG GGGGACCAAC AGCCCAGCGC CTTGGGGAAA GGCGCCGAAG TGGTGCTTGC CAAAATAGTG CATCTCGCGC TGTACCTGTT GCCACTGGGA TTGGTGATAA GTGGCTACCT AATTTCGACA GCCGATGGCC GTGCCCTGGA GCTGCTGGGG CTGGTATCCA TTCCATCGCT TGTGTCATTT CCGGGTCAGG AAGATACGGC TGGACAAATC CACGGTGTGC TTGCGTGGCT ATTAATCGCC CTGGTGAGTG CCCATGCGCT GGCTGCCATC AAACACCACC TTATTAACAG AAACGCCACT TTATTAAGAA TGCTAAGGCC CCAAAAGGAA ATCTGA
|
Protein sequence | MWRNRASGYG WIAIGIHWMM AVLILGLFAL GLWMVELNYY SQWYQVAPYW HKGLGGVVFA LLLLRLGIRL GDQQPSALGK GAEVVLAKIV HLALYLLPLG LVISGYLIST ADGRALELLG LVSIPSLVSF PGQEDTAGQI HGVLAWLLIA LVSAHALAAI KHHLINRNAT LLRMLRPQKE I
|
| |