| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0941 |
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| Symbol | |
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| ID | 4603193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1138366 |
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| End bp | 1139229 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639780276 |
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| Product | type IV pilus assembly protein PilM |
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| Protein accession | YP_926818 |
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| Protein GI | 119774078 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00121158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAACAA GGTCTTGGTT TTACGCACTG TTTTTTTCGG CTTCCTTTGC TGGCGCTTTG
CCGTGCCAAG CGGCCGACGC ATCGCTTATC ACTACCATAC CCAACAGCTG GCAATTCACC
CTGCTTACTG AGGCGCTCAA GCGCTCGGGC ACCAACTATC AGATATCCCA ACTAAGCTCA
GAGATGAACC AAAAGCGCAA AGTTGAAGAG GCGCTTGAGG GCAACATTGA TGTCTTTTGG
AGCATGACCT CAGCCGAACT CGAACGCACC GTTTTACCCA TCAGGGTGCC CTTGTTCAAA
GGGCTGCTGG GTAACCGGTT GCTTATCATC CGTGAAGCGG ATCAGGGCCG TTTTGCCAAG
GTTAAAAGCA AACAGGATTT CAGTGCTTTT CGAGCAGGTC AAAACCGTTA CTGGCCCGAC
GCTACCATTA TCGAATCCAA TGGTTTGCCG CTGATTACCA GTTACAAGTA CAAAAACCTT
TACCCCATGC TCGAAGGCGG TCGTTTCGAT TATCTGGCGC TGGGCGCTCA GGAAATCTGG
GATGAGTTGG CCAAACATCC TGATCCGGCT CTGAAAGTCG ATAGCCACGT CTTATTGCAA
TACCGCAGTC CTGCGTACTT CTTTGTCTCC CCCAAACGTC AGGCGCTGGC AGAAGATCTA
AACCGTGGTC TAGAGGCCAT GATTGCCGAT GGCAGTTTCG ATCGCATGTT CAATCAAGAG
CTTAAAATCG ATGAGCTTTA TCGTATAGCC AAGTTCAATG AACGGGTCAT CATCCGCTTG
AATACGTCGG ATTTGAGCCC ACAGACGCCG GTACACCGGC CTGAGTTATG GCTCGATCTG
TTCAGTATGG AGGGGGTGAA ATGA
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| Protein sequence | MRTRSWFYAL FFSASFAGAL PCQAADASLI TTIPNSWQFT LLTEALKRSG TNYQISQLSS
EMNQKRKVEE ALEGNIDVFW SMTSAELERT VLPIRVPLFK GLLGNRLLII READQGRFAK
VKSKQDFSAF RAGQNRYWPD ATIIESNGLP LITSYKYKNL YPMLEGGRFD YLALGAQEIW
DELAKHPDPA LKVDSHVLLQ YRSPAYFFVS PKRQALAEDL NRGLEAMIAD GSFDRMFNQE
LKIDELYRIA KFNERVIIRL NTSDLSPQTP VHRPELWLDL FSMEGVK
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