Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0912 |
Symbol | pgi |
ID | 4603164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 1101444 |
End bp | 1103081 |
Gene Length | 1638 bp |
Protein Length | 545 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639780247 |
Product | glucose-6-phosphate isomerase |
Protein accession | YP_926789 |
Protein GI | 119774049 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0166] Glucose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.283196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCGAG TGACCAATAC TCCTGAATGG CAGAAACTGA AAGAATATTC CAACAAACTG CCTCATATGC GTGAACTTTT TGCGACTGAC AGCGCACGTT TCGACAAAAT GTCGCTGAAA GCCTGTGGTC TGTTTCTGGA TTACTCCAAA AACCGCGTAA CAGAAGTCGT GCTGGGTGCC TTGTTCGATT TGGCAAAGCA AGCTCAGCTA GAAGCCCGCA TCAACGCCAT GTTCGCCGGT GATATTATCA ACACCACTGA AAAGCGTGCC GTACTGCACA CCGCACTGCG TGCGCCAAAT GATGCTGTAG TTGAAGTGGA TGGTGTCAAT GTGGTGCCGG AAGTCCATGC TACTCTGGAT AAAATTGAAT CCTTCGTTGC CTCAATTACC TCTGGCGAAT GGCGCGGTTA CACGGGTAAA GCTATCACCG ATATTGTCAG CATAGGTATT GGCGGCTCAT TCCTCGGGCC CAAAATTGTC ACCCAGGCGC TGCGTCCATA CTGGACAGGC AAGCTGAACT GTCACTTTGT TGCCAACGTG GATGCCACCT CGCTGGTTGA AAAGCTCAAG CTGGTCGACC CGGAAACAAC TCTGTTCCTG ATGTCATCCA AGTCGTTTGG CACTCAGGAA ACCCTCACCA ATACCCTGAG TGCCCGCGAC TGGTTCCTGC AAAGCGGTGC TTCTCAGGCT GATGTAGCCA AACACTTTGC CGCTGTGACC TCCAACGTGG CCAAGGCGAC TGATTTCGGT ATCGATGAAG CCAATGTCTT CCCAATGTGG GACTGGGTTG GTGGTCGCTA CTCACTCTGG TCTGCCATTG GTCTGCCTAT TGCACTGATG GTTGGCATGG ATAACTACCG GGCGCTGCTC GCCGGTGCCC GCAGTATGGA CGAACACTTC ACCTCGGCGC CGCTGGCTGA GAACATGCCG GTGATTATGG GTCTGCTGTC GGTGTGGTAT GGCAACTTTT TCAATGCCCA GTCACACGTA GTGCTCACCT ATGACCACTA CCTGCGAGGT TTGCCCGCTT ACTTCCAGCA GCTTGACATG GAAAGTAACG GCAAGTCTGC CATGATGGAT GGCGAAACCG TGGATTTCAG CACTGGCCCG GTTATCTGGG GCGGTGAAGG TACCAATGGT CAGCATGCCT ATCACCAGTT GTTACATCAG GGCACTGCAC TCATTCCTGC CGACTTCATT ATGCCGCTAC AAAGTCATAA TCCGCTGGGT GAACATCATG TGCAGCTTGC ATCCAATTGC TTCGGACAAA CCCAGGCTTT GATGCAGGGG CGCACCTACG AAGAAGCCTT GGCTGAACTT GCAGCAAGCA ATCTCAGTGA TGATGAGAAG AGTCTTATCG CCCGTCATAA GGTTATGGAG GGTAACAAGC CGAGCAACAC CCTGCTGATG GACAAACTGA CACCTTCCAC ATTGGGTGCA CTGATAGCGC TGTACGAGCA CAGAACCTTT GTTCAGGGTG TGATTTGGGA TATTAACTCT TTCGACCAGT GGGGCGTGGA GCTGGGAAAA ACGCTGGGCA ATGACGTGCT GGCGCGCCTG ACCGCCGATG AGGATGCCAG CGCACTGGAC TCCTCCAGTA ACGCGCTCAT TAATTTGTTC CGCAAAGGAC AAATTTAG
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Protein sequence | MSRVTNTPEW QKLKEYSNKL PHMRELFATD SARFDKMSLK ACGLFLDYSK NRVTEVVLGA LFDLAKQAQL EARINAMFAG DIINTTEKRA VLHTALRAPN DAVVEVDGVN VVPEVHATLD KIESFVASIT SGEWRGYTGK AITDIVSIGI GGSFLGPKIV TQALRPYWTG KLNCHFVANV DATSLVEKLK LVDPETTLFL MSSKSFGTQE TLTNTLSARD WFLQSGASQA DVAKHFAAVT SNVAKATDFG IDEANVFPMW DWVGGRYSLW SAIGLPIALM VGMDNYRALL AGARSMDEHF TSAPLAENMP VIMGLLSVWY GNFFNAQSHV VLTYDHYLRG LPAYFQQLDM ESNGKSAMMD GETVDFSTGP VIWGGEGTNG QHAYHQLLHQ GTALIPADFI MPLQSHNPLG EHHVQLASNC FGQTQALMQG RTYEEALAEL AASNLSDDEK SLIARHKVME GNKPSNTLLM DKLTPSTLGA LIALYEHRTF VQGVIWDINS FDQWGVELGK TLGNDVLARL TADEDASALD SSSNALINLF RKGQI
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