Gene Sama_0895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0895 
Symbol 
ID4603147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1082738 
End bp1084402 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content54% 
IMG OID639780230 
Producthydroxylamine reductase 
Protein accessionYP_926772 
Protein GI119774032 
COG category[C] Energy production and conversion 
COG ID[COG1151] 6Fe-6S prismane cluster-containing protein 
TIGRFAM ID[TIGR01703] hydroxylamine reductase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.62617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTTGTA TTCAGTGTGA ACAGACCATT CGTACCCCCG CCGGCAACGG TTGCAGCTAT 
GCACAGGGCA TGTGCGGCAA GCTGGCAGCA ACCTCAGACC TGCAAGATCT GCTGATTTAT
ATGCTCAAGG GCGTTTCCGC CTGGGCGGTG AAAGCCCGTG AGTTGGGACT TCCTCCAACT
GAGGCCGATA CCTTTGTGCC CAAGGCTTTC TTTGCGACCC TGACCAACGT GAATTTCGAT
GATGAACGCA TCATAGAGTA CGCCAGAAAG GCCGAGAGTC TGCGCAACGT GCTTAAAACC
CAATGCACTG AGGCTGCCCA AAAGGCGGGT ATTCGCCTTG AATCCTTACC GGACAGTGCC
TCTGTGCTGC TTGGCACTTC AAAGCCAGAG CTGCTGGAGC AAGCCAAGGC GGCGCTGCCT
AATCTGGGTA AGGATGACAT CCACGAAGAT GTGATGGCGT TAAGGCTTTT GTGCCTTTAT
GGTCTGAAAG GCGCTGCCGC CTACATGGAA CATGCCCGGG TGCTGGAGCA GCAATCCGCT
GACATTGCGG CTGAGTTTCA TCGCATCATG GCCTTCCTGG GTACCGACAG TGTGGATGCC
GATGCACTCT TTACCGTCGC CATGGACATT GGTCAGCTGA ATTTCAAGGT GATGGCTATG
CTCGATGAAG GCGAAACCGC TGCCTTCGGC CACCCGGAGC CGACCCAAGT AAATACCAAG
CCGGTAAAGG GAAAGGCGAT TCTGGTGTCG GGCCACGACA TGAAAGACCT TGAGCTTATC
CTCAAGCAAA CCCAGGGCAA GGGAATTAAC GTTTACACCC ATGGCGAGAT GTTGCCAGCG
CTGGCATATC CCGAGTTTAA GCAATACCCC CATCTGGTAG GCAACTACGG CAGCGCCTGG
CAAAACCAGC AAAAGGAATT TGCCAACTTC CCCGGTGCCG TGGTGATGAC GTCAAACTGC
ATTATCGACC CTAACGTTGG CCAATACGCC GACCGTATCT TTACCCGCAG CATCGTCGGC
TGGCCAGGGG TTGTGCACCT TGAAGGTGAT GATTTTTCTG CCGTGATTGA GAAAGCGTTG
TCGCTGGAGG GGTTTCTCTA TGACGAGATC TCCCATCAGA TCACCATAGG TTTCGCCCGT
AATGCGCTGA TGGCAGCAGC TCCGGCCGTG GTCGAAAACG TGAAAAATGG CAGTATCCGC
CACTTCTTCC TGGTAGGTGG CTGTGATGGT GACAAAGCCG AGCGGAGTTA CTTTACCGAT
TTTGCCAAGG CAACGCCGAA CGATAGCCTG ATCCTGACTC TGGGCTGTGG TAAGTACAAG
TTCAATAAGT TGGAGTTCGG TGACATCAAC GGCATTCCAA GGCTACTGGA TATTGGCCAG
TGCAACGATG CCTACTCAGC CATTCAGCTG GCGATTGCTC TGTCGGAGGT GTTTGAGTGC
GATATCAACG AGCTGCCATT GAGCCTGGTG CTGTCTTGGT TTGAACAAAA GGCGATAGTG
ATTTTGCTGA CCCTGCTGTC TTTGGGGGTG AAGAATATTC GCACCGGTCC GACACCGCCA
GCGTTCCTGA CGCCAAATCT GCTCAAGGTT CTCGAGGACA AGTTTGGTCT TAAAAATACC
ACCACGGTGG AGGCCGATCT GAATGCGATT CTGAATGTCG CCTGA
 
Protein sequence
MFCIQCEQTI RTPAGNGCSY AQGMCGKLAA TSDLQDLLIY MLKGVSAWAV KARELGLPPT 
EADTFVPKAF FATLTNVNFD DERIIEYARK AESLRNVLKT QCTEAAQKAG IRLESLPDSA
SVLLGTSKPE LLEQAKAALP NLGKDDIHED VMALRLLCLY GLKGAAAYME HARVLEQQSA
DIAAEFHRIM AFLGTDSVDA DALFTVAMDI GQLNFKVMAM LDEGETAAFG HPEPTQVNTK
PVKGKAILVS GHDMKDLELI LKQTQGKGIN VYTHGEMLPA LAYPEFKQYP HLVGNYGSAW
QNQQKEFANF PGAVVMTSNC IIDPNVGQYA DRIFTRSIVG WPGVVHLEGD DFSAVIEKAL
SLEGFLYDEI SHQITIGFAR NALMAAAPAV VENVKNGSIR HFFLVGGCDG DKAERSYFTD
FAKATPNDSL ILTLGCGKYK FNKLEFGDIN GIPRLLDIGQ CNDAYSAIQL AIALSEVFEC
DINELPLSLV LSWFEQKAIV ILLTLLSLGV KNIRTGPTPP AFLTPNLLKV LEDKFGLKNT
TTVEADLNAI LNVA