Gene Sama_0863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0863 
Symbol 
ID4603115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1053718 
End bp1054254 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content50% 
IMG OID639780198 
Productdinucleoside polyphosphate hydrolase 
Protein accessionYP_926740 
Protein GI119774000 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000145105 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0591325 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTTTG GAGTCCATGT GATTGATAGC GACGGCTTTC GCGCAAATGT GGGCATCATC 
ATCTGTAACG CTTATGGCCA AGTCATGTGG GCCAGACGAT TTGGACAACA TTCATGGCAA
TTTCCCCAAG GGGGCCTGGA TGACGGCGAA ACTGCCGAAG ATGCCATGTA CCGTGAATTA
TACGAGGAAG TGGGCCTGAG GCCCGAACAT GTACAAATCC TCACTTCAAC ACGATCCTGG
CTCAGGTATC GTTTGCCCAA ACGTTTGGTA CGGCAAGACA GTAGACCTGT CTGTATCGGG
CAAAAACAGA AATGGTTTTT GTTGATGCTC AAGAGTCAGG AAAGCGCCAT TAATCTGAAT
TCTTCCGGTC ATCCTGAATT TGATGACTGG CGTTGGGTCA GTTATTGGTA TCCTGTTCGG
CAAGTCGTGT CGTTCAAGCG TGATGTTTAC CGAAAGGTGA TGAAAGAGTT TGCCCCTGTG
GCACTGGCGC TGCAGGCAAG GGAAATTCCA CGGGGTAAGC GAAACAGAGG GCGGTAA
 
Protein sequence
MYFGVHVIDS DGFRANVGII ICNAYGQVMW ARRFGQHSWQ FPQGGLDDGE TAEDAMYREL 
YEEVGLRPEH VQILTSTRSW LRYRLPKRLV RQDSRPVCIG QKQKWFLLML KSQESAINLN
SSGHPEFDDW RWVSYWYPVR QVVSFKRDVY RKVMKEFAPV ALALQAREIP RGKRNRGR