Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0778 |
Symbol | |
ID | 4603030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 960154 |
End bp | 961428 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639780112 |
Product | tRNA nucleotidyltransferase (CCA-adding enzyme) |
Protein accession | YP_926655 |
Protein GI | 119773915 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | [TIGR01942] poly(A) polymerase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000683144 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTTTATC GCCTGAACAA GGCCGGTTAC GAGGCCTTTT TGGTGGGTGG CGGTGTACGC GATCTGCTGC TGGGCCTGGA GCCGAAAGAC TTTGACGTGG TGACCAACGC CACCCCCGAA GACATCAAAA AGTTGTTCCG CAACTGCCGC CTGGTGGGTC GCCGTTTCCG TTTGGCCCAC ATCGTATTTG GCCGTGACGT GATTGAAGTA GCGACCTTCC GTGGTCATCA CGGCAATGAG GATGGCGACA AGATTTCCAA GGCCAACGCC GAGGGACGCC TGCTGCGGGA CAACGTGTAC GGCAGCATCG ATGAAGACGC CGAACGCCGC GACTTTACCG TAAACGCCCT CTACTACGAC ATCAGCGATT ACTCTATCCG CAGCTACGGC GGCGGTATGG AAGATCTCAA CGACGGTGTA TTGCGCCTGA TTGGCGATCC TGAGACCCGC TACCGCGAAG ACCCGGTGCG GATGATCCGC GCCGTGCGCT TTGCCACCAA GCTGGGCATG CGCATCGAAG AGGTAACAGC CGCGCCAATC CGCAAACTGG CACCGCTGCT GCGCGATATT CCGGCCGCCC GCATGTACGA AGAAGTGCTC AAGCTGTTTT TTGCGGGCAA GGGTCAGGCA AACTATCAGA TGATGCAGGA ATATCAGCTA TTTGCGCCGA TTTTCCCGCT GCTGGCCGAC ACCATTGCCG ACTCACCAAA GGGCCACTGT GCCCGTATGG TGAACCTGGT GATGCGCAAT ACCGATATCC GGGTCATGGA AGACAAGCCA GTCACACCGG CCTTCTTCTA TGCGGCCCTG CTGTGGTATC CGCTGAAAAG CCGCGCCGAA GAAATTGCCA ACGAGAGTGG CCTCAGTCTG TACGATGCCT ATTTTGCCGC CATGGGCGAT GTGCTCGAGC AGCAATGCCA GACCATTTCG CTGCCCAAGC GCTTCAGTGT TCCGGCTCGG GATATCTGGC AGATGCAGCT CAGATTTGAG CGCAGCCAGG GTACCCGCGC CTTTAAACTG ATGGAAAGCC CCAAGTTCCG CGCCGGTTAT GATTTGCTGT TGATGCGCGC CGAAATAGAG GGTGGCAATC TGCAAAAGAC CGCCAGCTGG TGGCAGTCGT TTGTAGAAGC GCCGGAAGAA GAACGTGGCA ATATCGCCCG CGGCGGTGCC AAGAGTGATG CTCCCCGCAA CCGCAAACGC CGCGTTCGCC GTCGCCCCCG CAGTGAAGGT GGCAGTGGCG AAGGAGCCAA GGCAAACACC GGCAGCGACA GCTGA
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Protein sequence | MLYRLNKAGY EAFLVGGGVR DLLLGLEPKD FDVVTNATPE DIKKLFRNCR LVGRRFRLAH IVFGRDVIEV ATFRGHHGNE DGDKISKANA EGRLLRDNVY GSIDEDAERR DFTVNALYYD ISDYSIRSYG GGMEDLNDGV LRLIGDPETR YREDPVRMIR AVRFATKLGM RIEEVTAAPI RKLAPLLRDI PAARMYEEVL KLFFAGKGQA NYQMMQEYQL FAPIFPLLAD TIADSPKGHC ARMVNLVMRN TDIRVMEDKP VTPAFFYAAL LWYPLKSRAE EIANESGLSL YDAYFAAMGD VLEQQCQTIS LPKRFSVPAR DIWQMQLRFE RSQGTRAFKL MESPKFRAGY DLLLMRAEIE GGNLQKTASW WQSFVEAPEE ERGNIARGGA KSDAPRNRKR RVRRRPRSEG GSGEGAKANT GSDS
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