Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0773 |
Symbol | |
ID | 4603025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 956447 |
End bp | 957217 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639780107 |
Product | ABC-type polysaccharide/polyol phosphate export systems permease component |
Protein accession | YP_926650 |
Protein GI | 119773910 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCCT TGTACCTGAC TGCATTCAAA AGCATTCTGA TTAAAGAAAT CACCCGTTTC ACCCGTATCT GGGTGCAAAC CCTGGTGCCC CCTGCCATCA CCATGACCTT GTATTTTATG ATTTTTGGTA ATCTGGTGGG CGGCCGTATC GGCCAAATGG GCGGCGTTAG CTATATGGAG TTTATTGCCC CCGGTCTCAT CATGATGTCG GTCATCACCA ACTCCTACTC CAACGTGGCG TCCAGCTTTT TCAGTGCCAA GTTTCAGCGC AATCTCGAAG AGCTTATCGT GGCGCCCGTG CCCCATTACG TGATGATTGC CGGTTACGTG GGCGGCGGCG TTGCCCGTGG TCTCTGTGTG GGCCTGATAG TGACCCTGGT GGCACTGAGC TTTGTGGATC TCAGCATCCA TCATCTGGGG CTGGTAGCCG TGACCGTGTT TATCACCTCT GTGCTCTTTT CACTGGGCGG ACTTATCAAT GCGGTGTTTG CCAAGAGCTT CGATGACATC AGCATTATCC CCACCTTCGT GCTGACGCCA CTGACCTATC TGGGCGGGGT ATTCTATTCG CTCTCTTTGC TGCCGGACTT CTGGCATGCG GTCTCTACCT TAAACCCCGT GGTTTACATG ATAAACCTGT TCCGCTACGG CTTTCTCGGG GTGGCAGATT TGAGCCTGGG CGTGTCCTTT GCGGTGATGC TGAGCCTTTG TGCGGGGCTG TGGTACCTGG CGTATTACCT GATTTCACGG GGTATTGGGC TTCGCAGTTG A
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Protein sequence | MKALYLTAFK SILIKEITRF TRIWVQTLVP PAITMTLYFM IFGNLVGGRI GQMGGVSYME FIAPGLIMMS VITNSYSNVA SSFFSAKFQR NLEELIVAPV PHYVMIAGYV GGGVARGLCV GLIVTLVALS FVDLSIHHLG LVAVTVFITS VLFSLGGLIN AVFAKSFDDI SIIPTFVLTP LTYLGGVFYS LSLLPDFWHA VSTLNPVVYM INLFRYGFLG VADLSLGVSF AVMLSLCAGL WYLAYYLISR GIGLRS
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