Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0754 |
Symbol | |
ID | 4603007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 931615 |
End bp | 933336 |
Gene Length | 1722 bp |
Protein Length | 573 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639780089 |
Product | sulfate transporter/antisigma-factor antagonist STAS |
Protein accession | YP_926632 |
Protein GI | 119773892 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGATAT TCAACGCCTT TGACAGCAAA TCCCGCACCA GCGACCTCAT GGGTGGGGTG ACCGCCGCCA TTGTATCGCT GCCACTGGCA CTGGCCTTTG GTGTGGCCTC CGGCGCCGGT GCACAGGCCG GTATTTACGG TGCTCTCCTG GTGGGCCTGT TTGCCGCCCT CTTTGGCGGC ACCCGTACCC TGATTTCTGA ACCCACGGGC CCCATGACTG TGGTCACCAC GGCGGTGATT GCCAGCTTCA CCGCTACCCA TCCCGATAAG GGGCTGGCCA TGGCCTTTAC CGTGGTGATG CTGGCGGGTC TGGTACAGAT TATCCTCGGC GCGCTCAAGT TCGGCCGCTA CATAACGCTG ATGCCCTATA GCGTGATCTC CGGCTTTATG TCGGGTATCG GCGTGCTGCT GATTATTCTG CAGCTGCCCA ACCTGGTGGG GGTTGGCGGC ATCACCGGCG GCGCAGTAGG AGTCATTGAA GCCCTGCCCA CATTGGTCAG CAGTATCAAA TGGCAGGAAC TGGCGCTGGC GCTCTCGGCA CTGGCACTGA TGCAAATTGT GCCCAAACTC ATCAAAATGC GCTTGCCACC CCAGCTACTG GCGCTGGTGT GTTGTACCCT GGCCTCGGTA TTGCTGCTGG ATATAGAGGA TGTGCGCCGC ATCGGTGAGA TAAACATCGG CCTGCCATCG CTGATTATCC CTACTTTTAC GTACGGCGAG CTGACCCACA TGCTTGTCAG CGCCGTGATG CTGGGTGCGC TCGGCTGTAT CGACTCGCTC ATTACCGCAG TCATTGCCGA TCGCCTTACC CGGGTCGAGC ATGACTCCAA CAAAGAGCTG ATTGGTCAGG GCCTTGGCAA TATCGCCTCG GGTCTGTGCG GTGGTCTGCC GGGTGCAGGC TCCACCATGG GCACTGTGGT CAACATTCAG GCGGGTGCCA GCAGCGCCTT TTCAGGCGTG GTGCGGGTAC TGACACTGCT TATCGTGTTT TCCCTCGCTG CCGGCATAGT CCAGTACATC CCCATGGCGG TGCTGGCCGC CATTGCCTTC AAGGTGGGTC TGAATATTCT CGACTGGGCC TTTGTGAAGC GCGCCCACCA GCTGTCGCGC TCTGCAGCCA TGACCATGTA CGTGGTCATG GTGCTCACCG TGTTTGTGGA TTTAATTGTG GCCGTGGGCG TGGGCATGTT CATCGCCAAC CTCATCACCA TCGACCGCCT GTCGCAGCTG CAGGAGCGCA ATATCAACGC CATCAACGAC TCGGGCGAAG CATCCGACAT GCGTCCCAAT GAAAAGCGCC TGCTGGATGC TATCAACGAG AAATCCAACA CCCTGCTTTT GAGCCTGAGC GGCCCGATGA TTTTCGGCGT TGCCAAGACT TTGCAGCGGG AGTCCATTGC GGTGAAATCT GCCCAGACCC TGGTGCTGGA TCTGTGCCGG GTACCCTACA TGGACTCCAC CACCGGCCTT GCCATCGAAA ACGTACTGCT GGACGCCAAA GACTGTGGCT GCAATGTGTA TCTGGTGGTG CCGCGCAAAT ACAGTTGGGA AGCTAACTTT GTTGACCACC ACAGCGACCT GCCCATCTTC CACAGCCGCG CCGACGCACT GTCAAGCCTC GCTGCCTCGC TGGGCATTGA AGTGGACGAG CTAAACGCCA AGGCTGCCAA GCCAGGCAGC GCGGCAGAGG GTAAGACAAC ATCCGGCAGT GCCTCAGTCT GA
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Protein sequence | MPIFNAFDSK SRTSDLMGGV TAAIVSLPLA LAFGVASGAG AQAGIYGALL VGLFAALFGG TRTLISEPTG PMTVVTTAVI ASFTATHPDK GLAMAFTVVM LAGLVQIILG ALKFGRYITL MPYSVISGFM SGIGVLLIIL QLPNLVGVGG ITGGAVGVIE ALPTLVSSIK WQELALALSA LALMQIVPKL IKMRLPPQLL ALVCCTLASV LLLDIEDVRR IGEINIGLPS LIIPTFTYGE LTHMLVSAVM LGALGCIDSL ITAVIADRLT RVEHDSNKEL IGQGLGNIAS GLCGGLPGAG STMGTVVNIQ AGASSAFSGV VRVLTLLIVF SLAAGIVQYI PMAVLAAIAF KVGLNILDWA FVKRAHQLSR SAAMTMYVVM VLTVFVDLIV AVGVGMFIAN LITIDRLSQL QERNINAIND SGEASDMRPN EKRLLDAINE KSNTLLLSLS GPMIFGVAKT LQRESIAVKS AQTLVLDLCR VPYMDSTTGL AIENVLLDAK DCGCNVYLVV PRKYSWEANF VDHHSDLPIF HSRADALSSL AASLGIEVDE LNAKAAKPGS AAEGKTTSGS ASV
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