Gene Sama_0754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0754 
Symbol 
ID4603007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp931615 
End bp933336 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content59% 
IMG OID639780089 
Productsulfate transporter/antisigma-factor antagonist STAS 
Protein accessionYP_926632 
Protein GI119773892 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0659] Sulfate permease and related transporters (MFS superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCGATAT TCAACGCCTT TGACAGCAAA TCCCGCACCA GCGACCTCAT GGGTGGGGTG 
ACCGCCGCCA TTGTATCGCT GCCACTGGCA CTGGCCTTTG GTGTGGCCTC CGGCGCCGGT
GCACAGGCCG GTATTTACGG TGCTCTCCTG GTGGGCCTGT TTGCCGCCCT CTTTGGCGGC
ACCCGTACCC TGATTTCTGA ACCCACGGGC CCCATGACTG TGGTCACCAC GGCGGTGATT
GCCAGCTTCA CCGCTACCCA TCCCGATAAG GGGCTGGCCA TGGCCTTTAC CGTGGTGATG
CTGGCGGGTC TGGTACAGAT TATCCTCGGC GCGCTCAAGT TCGGCCGCTA CATAACGCTG
ATGCCCTATA GCGTGATCTC CGGCTTTATG TCGGGTATCG GCGTGCTGCT GATTATTCTG
CAGCTGCCCA ACCTGGTGGG GGTTGGCGGC ATCACCGGCG GCGCAGTAGG AGTCATTGAA
GCCCTGCCCA CATTGGTCAG CAGTATCAAA TGGCAGGAAC TGGCGCTGGC GCTCTCGGCA
CTGGCACTGA TGCAAATTGT GCCCAAACTC ATCAAAATGC GCTTGCCACC CCAGCTACTG
GCGCTGGTGT GTTGTACCCT GGCCTCGGTA TTGCTGCTGG ATATAGAGGA TGTGCGCCGC
ATCGGTGAGA TAAACATCGG CCTGCCATCG CTGATTATCC CTACTTTTAC GTACGGCGAG
CTGACCCACA TGCTTGTCAG CGCCGTGATG CTGGGTGCGC TCGGCTGTAT CGACTCGCTC
ATTACCGCAG TCATTGCCGA TCGCCTTACC CGGGTCGAGC ATGACTCCAA CAAAGAGCTG
ATTGGTCAGG GCCTTGGCAA TATCGCCTCG GGTCTGTGCG GTGGTCTGCC GGGTGCAGGC
TCCACCATGG GCACTGTGGT CAACATTCAG GCGGGTGCCA GCAGCGCCTT TTCAGGCGTG
GTGCGGGTAC TGACACTGCT TATCGTGTTT TCCCTCGCTG CCGGCATAGT CCAGTACATC
CCCATGGCGG TGCTGGCCGC CATTGCCTTC AAGGTGGGTC TGAATATTCT CGACTGGGCC
TTTGTGAAGC GCGCCCACCA GCTGTCGCGC TCTGCAGCCA TGACCATGTA CGTGGTCATG
GTGCTCACCG TGTTTGTGGA TTTAATTGTG GCCGTGGGCG TGGGCATGTT CATCGCCAAC
CTCATCACCA TCGACCGCCT GTCGCAGCTG CAGGAGCGCA ATATCAACGC CATCAACGAC
TCGGGCGAAG CATCCGACAT GCGTCCCAAT GAAAAGCGCC TGCTGGATGC TATCAACGAG
AAATCCAACA CCCTGCTTTT GAGCCTGAGC GGCCCGATGA TTTTCGGCGT TGCCAAGACT
TTGCAGCGGG AGTCCATTGC GGTGAAATCT GCCCAGACCC TGGTGCTGGA TCTGTGCCGG
GTACCCTACA TGGACTCCAC CACCGGCCTT GCCATCGAAA ACGTACTGCT GGACGCCAAA
GACTGTGGCT GCAATGTGTA TCTGGTGGTG CCGCGCAAAT ACAGTTGGGA AGCTAACTTT
GTTGACCACC ACAGCGACCT GCCCATCTTC CACAGCCGCG CCGACGCACT GTCAAGCCTC
GCTGCCTCGC TGGGCATTGA AGTGGACGAG CTAAACGCCA AGGCTGCCAA GCCAGGCAGC
GCGGCAGAGG GTAAGACAAC ATCCGGCAGT GCCTCAGTCT GA
 
Protein sequence
MPIFNAFDSK SRTSDLMGGV TAAIVSLPLA LAFGVASGAG AQAGIYGALL VGLFAALFGG 
TRTLISEPTG PMTVVTTAVI ASFTATHPDK GLAMAFTVVM LAGLVQIILG ALKFGRYITL
MPYSVISGFM SGIGVLLIIL QLPNLVGVGG ITGGAVGVIE ALPTLVSSIK WQELALALSA
LALMQIVPKL IKMRLPPQLL ALVCCTLASV LLLDIEDVRR IGEINIGLPS LIIPTFTYGE
LTHMLVSAVM LGALGCIDSL ITAVIADRLT RVEHDSNKEL IGQGLGNIAS GLCGGLPGAG
STMGTVVNIQ AGASSAFSGV VRVLTLLIVF SLAAGIVQYI PMAVLAAIAF KVGLNILDWA
FVKRAHQLSR SAAMTMYVVM VLTVFVDLIV AVGVGMFIAN LITIDRLSQL QERNINAIND
SGEASDMRPN EKRLLDAINE KSNTLLLSLS GPMIFGVAKT LQRESIAVKS AQTLVLDLCR
VPYMDSTTGL AIENVLLDAK DCGCNVYLVV PRKYSWEANF VDHHSDLPIF HSRADALSSL
AASLGIEVDE LNAKAAKPGS AAEGKTTSGS ASV