Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0753 |
Symbol | |
ID | 4603006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 929596 |
End bp | 931323 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639780088 |
Product | hypothetical protein |
Protein accession | YP_926631 |
Protein GI | 119773891 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.978907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTTG CACAACCCTA TGATCCTTCC CGCGACGAGA TTTTCTGGCG AACCGCTGTT GCCAACATTC GTACGGGGCT TGAAAACTTC AACATGCTCA CGCCAAAGTT CAACATTGAA CCTCACCATC GGATTTCATC GGCGGGTTCC TGTTTTGCTC AGCATATAGG TAACTGGTTG ACGCAAAATG ATTACTCTTA TAATAGGAGC CAATTAAACT CCGATGAAGT CTCCAGCTTT GCCTTTGGCA ATATCTACAC CCCTCGTTCG TTACTTCAGT GGTTTGTATG TTCCGATGAT GAATTATCGG AGCACAGTGT GTACTTCGAG GCACAGTCCA GCCGTTACTT CGACTTGTTA TTACCAAAAG TTGCTGACGC GGGCTATCCG TCACTGGATG AATTACTGGC GTTCAGGACG CTGGTGATGG AGGAAACCCG AGCTCAGTTG GCACAAAGTG AATGTTTTAT TTTTACACTT GGACTGATTG AGACCTGGGT CGATCGCAAC GGCATTTGTT ATCCAAGTTG CCCCGGGGTG AAGTTTGGTG AGTATGATCC GGAGAAATAC CAACTTAAGG TGTTTAATTA TCAGGAAATA TTTTCCGACC TCAGTGAGCT TTTCAAGCAA ATCAAGGTTG TAAACCCTGA CATACGTTTT GTGCTGACTG TATCTCCCGT CCCTTTGACG GCTACAGCCA CAGATGACCA CGTATTGGTG GCTAATGGCT ATTCAAAATC GGTCCTGCGC GCAGTTGCGG GGGCATTCTG CCAAGGGCGG GATGATGTCA GCTACTTTCC ATCATTTGAA CTTATCACCA CCCCCTTACC GGGGGATTTT CGCTATCTGG AAAATCGGCG CACTGTATCT GAGAAAGGCG TTGGCTATGT GATGCGGCAT TGGGCCACGT CGCTAAATGG TAAGCAAACA CCAGATGCAA GCCACATCGA AGCTGCCTGC GATGATGAAA TGCTGGATGC CATTAAGAAG GACACATCAA GTGAACTGGG CACACCGCTA ACCCTCATTG GTGATAGCCA TTTTGGCAAG TTGGCCAAGT CTTTTGAGCG GCTTGGACAG TCCTGCTGTG GTGGCATGGT GATGAATGGT TCCGGATTCG CTGAGCATAA ATTTACCCTG ACCAAGGATG CGGACATCAT GGTGCCGCTC GAAAGCGCAG AGTCCCGACG CCTGTGGCAG CCCATAATTA ACAACCTCGA CAGCTTATGC AGGGCTCAAC GACTGTCGGA GTCCTGGGTA TTGACCAATA TTGGGCTGCA AACCCACAAG ACAGTACCTG AGTTTATTCA ATGGATGAGA GCTGAGCGTC CAGAGCGGTT GAATCAGATA GATATTGAGG ACTATTTGGA GTTCTTTGAC GCCAACATGC GGGATCAAAT GACCATAGTA TTTCGCCTCA AGGAACAGGG GCACAGGGTT ATGGTGATTT CAGACACCCC ATTCTGGCAG TACTTTGAAG ACTCCAAGGG CATGGCCCCC TTCGTGATGG CCTACATGGA TGCGATGGAA TATGCGTGGC AGCAGATGGG GGTTGAGTTT TTTCATGCAG CGCGCGTTTT TAACGAAGAG GTAAACGACC CAATGCCTTA CGCCTCAACT TTCATTTCTG CAGACGGCAG TCGGGATTAC TTCCATGGTG GGGATTCTTA TTACGATTGG CTCGCCGGGA AATTATTGCC ATTACTGAAA GCCTGCCGTA TCTGGTGA
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Protein sequence | MALAQPYDPS RDEIFWRTAV ANIRTGLENF NMLTPKFNIE PHHRISSAGS CFAQHIGNWL TQNDYSYNRS QLNSDEVSSF AFGNIYTPRS LLQWFVCSDD ELSEHSVYFE AQSSRYFDLL LPKVADAGYP SLDELLAFRT LVMEETRAQL AQSECFIFTL GLIETWVDRN GICYPSCPGV KFGEYDPEKY QLKVFNYQEI FSDLSELFKQ IKVVNPDIRF VLTVSPVPLT ATATDDHVLV ANGYSKSVLR AVAGAFCQGR DDVSYFPSFE LITTPLPGDF RYLENRRTVS EKGVGYVMRH WATSLNGKQT PDASHIEAAC DDEMLDAIKK DTSSELGTPL TLIGDSHFGK LAKSFERLGQ SCCGGMVMNG SGFAEHKFTL TKDADIMVPL ESAESRRLWQ PIINNLDSLC RAQRLSESWV LTNIGLQTHK TVPEFIQWMR AERPERLNQI DIEDYLEFFD ANMRDQMTIV FRLKEQGHRV MVISDTPFWQ YFEDSKGMAP FVMAYMDAME YAWQQMGVEF FHAARVFNEE VNDPMPYAST FISADGSRDY FHGGDSYYDW LAGKLLPLLK ACRIW
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