Gene Sama_0753 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0753 
Symbol 
ID4603006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp929596 
End bp931323 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content49% 
IMG OID639780088 
Producthypothetical protein 
Protein accessionYP_926631 
Protein GI119773891 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.978907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTTG CACAACCCTA TGATCCTTCC CGCGACGAGA TTTTCTGGCG AACCGCTGTT 
GCCAACATTC GTACGGGGCT TGAAAACTTC AACATGCTCA CGCCAAAGTT CAACATTGAA
CCTCACCATC GGATTTCATC GGCGGGTTCC TGTTTTGCTC AGCATATAGG TAACTGGTTG
ACGCAAAATG ATTACTCTTA TAATAGGAGC CAATTAAACT CCGATGAAGT CTCCAGCTTT
GCCTTTGGCA ATATCTACAC CCCTCGTTCG TTACTTCAGT GGTTTGTATG TTCCGATGAT
GAATTATCGG AGCACAGTGT GTACTTCGAG GCACAGTCCA GCCGTTACTT CGACTTGTTA
TTACCAAAAG TTGCTGACGC GGGCTATCCG TCACTGGATG AATTACTGGC GTTCAGGACG
CTGGTGATGG AGGAAACCCG AGCTCAGTTG GCACAAAGTG AATGTTTTAT TTTTACACTT
GGACTGATTG AGACCTGGGT CGATCGCAAC GGCATTTGTT ATCCAAGTTG CCCCGGGGTG
AAGTTTGGTG AGTATGATCC GGAGAAATAC CAACTTAAGG TGTTTAATTA TCAGGAAATA
TTTTCCGACC TCAGTGAGCT TTTCAAGCAA ATCAAGGTTG TAAACCCTGA CATACGTTTT
GTGCTGACTG TATCTCCCGT CCCTTTGACG GCTACAGCCA CAGATGACCA CGTATTGGTG
GCTAATGGCT ATTCAAAATC GGTCCTGCGC GCAGTTGCGG GGGCATTCTG CCAAGGGCGG
GATGATGTCA GCTACTTTCC ATCATTTGAA CTTATCACCA CCCCCTTACC GGGGGATTTT
CGCTATCTGG AAAATCGGCG CACTGTATCT GAGAAAGGCG TTGGCTATGT GATGCGGCAT
TGGGCCACGT CGCTAAATGG TAAGCAAACA CCAGATGCAA GCCACATCGA AGCTGCCTGC
GATGATGAAA TGCTGGATGC CATTAAGAAG GACACATCAA GTGAACTGGG CACACCGCTA
ACCCTCATTG GTGATAGCCA TTTTGGCAAG TTGGCCAAGT CTTTTGAGCG GCTTGGACAG
TCCTGCTGTG GTGGCATGGT GATGAATGGT TCCGGATTCG CTGAGCATAA ATTTACCCTG
ACCAAGGATG CGGACATCAT GGTGCCGCTC GAAAGCGCAG AGTCCCGACG CCTGTGGCAG
CCCATAATTA ACAACCTCGA CAGCTTATGC AGGGCTCAAC GACTGTCGGA GTCCTGGGTA
TTGACCAATA TTGGGCTGCA AACCCACAAG ACAGTACCTG AGTTTATTCA ATGGATGAGA
GCTGAGCGTC CAGAGCGGTT GAATCAGATA GATATTGAGG ACTATTTGGA GTTCTTTGAC
GCCAACATGC GGGATCAAAT GACCATAGTA TTTCGCCTCA AGGAACAGGG GCACAGGGTT
ATGGTGATTT CAGACACCCC ATTCTGGCAG TACTTTGAAG ACTCCAAGGG CATGGCCCCC
TTCGTGATGG CCTACATGGA TGCGATGGAA TATGCGTGGC AGCAGATGGG GGTTGAGTTT
TTTCATGCAG CGCGCGTTTT TAACGAAGAG GTAAACGACC CAATGCCTTA CGCCTCAACT
TTCATTTCTG CAGACGGCAG TCGGGATTAC TTCCATGGTG GGGATTCTTA TTACGATTGG
CTCGCCGGGA AATTATTGCC ATTACTGAAA GCCTGCCGTA TCTGGTGA
 
Protein sequence
MALAQPYDPS RDEIFWRTAV ANIRTGLENF NMLTPKFNIE PHHRISSAGS CFAQHIGNWL 
TQNDYSYNRS QLNSDEVSSF AFGNIYTPRS LLQWFVCSDD ELSEHSVYFE AQSSRYFDLL
LPKVADAGYP SLDELLAFRT LVMEETRAQL AQSECFIFTL GLIETWVDRN GICYPSCPGV
KFGEYDPEKY QLKVFNYQEI FSDLSELFKQ IKVVNPDIRF VLTVSPVPLT ATATDDHVLV
ANGYSKSVLR AVAGAFCQGR DDVSYFPSFE LITTPLPGDF RYLENRRTVS EKGVGYVMRH
WATSLNGKQT PDASHIEAAC DDEMLDAIKK DTSSELGTPL TLIGDSHFGK LAKSFERLGQ
SCCGGMVMNG SGFAEHKFTL TKDADIMVPL ESAESRRLWQ PIINNLDSLC RAQRLSESWV
LTNIGLQTHK TVPEFIQWMR AERPERLNQI DIEDYLEFFD ANMRDQMTIV FRLKEQGHRV
MVISDTPFWQ YFEDSKGMAP FVMAYMDAME YAWQQMGVEF FHAARVFNEE VNDPMPYAST
FISADGSRDY FHGGDSYYDW LAGKLLPLLK ACRIW