| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0747 |
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| Symbol | |
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| ID | 4603000 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 919576 |
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| End bp | 923439 |
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| Gene Length | 3864 bp |
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| Protein Length | 1287 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780082 |
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| Product | signal transduction histidine kinase-like protein |
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| Protein accession | YP_926625 |
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| Protein GI | 119773885 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGGGA CTCATTTATT ACCGCCATCG TTATCACGTC AGTCTTTATT TTCACTCTGG
GTACCTATTT TAATTCTGGT CTTGGGCTAC GTGGTTGGTA GCCAGCTTGC TGAGCAACAG
AAGCTTGAAA ATAGGTATCG TGTTCAAGAG GTTATGCAGG AAAGGCTGGA GCAGATCACA
ACCGGTGTAA CTGAGAAAGT CTCACTCTAC CAATACGGCC TCAGGGGGGT GAGGGGCGCC
ATGCTCACCT ATGGCGTCGA TAACTTTGAC TATTCCCGCA TGCAGCTGTA CACCCAAAGC
CGCGATTACA GTCATGAGTT TCCGGGGGCG CGGGGGTTTG GTTTTATCCA ATATGTGCCG
GTTTCGGCAT TGGATACCTT TCTTGATTCC AGCGCAATGG AGCGGCCAGA TGGGCGCTTC
GCACTTCGAC AGCTGAATCC CCACGATGAC GATCTCTTTG TTATCCGTTT TATAGAGCCC
GAAGCCCGTA ATAAACAGGC GGTTGGTCTG GACATAGGCT CTGAGAGCAA CCGGCGTCAG
GCTGCGCTGC GTTCGGCACG GGAAAACAGT GTAACCCTGA CCGGCCCCAT TACCCTGGTT
CAGGCTAGTC AGAAAAGCTT GCAGGGTTTT TTGATTCTGA TGCCTGTCTA TCGGACTCCT
GACTCTGAAA CCAGCTCCAC CACGGGCATG GCCAATCTGG TTGGTTGGAG TTATGCCCCC
ATCCTCATTG ATGAAGTACT CAACACTATT TCGGGTCTGG AAGAACATTT GGTGTTGACC
ATTTATGATG TGACCGATGG AAGTGCGCAG CAATTTTTCC AGCGAGGCGC CCATGATGTC
GCTCTGACTC AGCATCAGGT AGATGCCGAT ATTGGGCTGT TCGGGCGTGA CTGGCGCTTG
AGTTTGTCAC CGGATCCCGC CTTCATCCAG CGTATGGCCT TGCCAGAGCC AAGCTCAACC
TTGCTCGATG CCTGGCTCAT CAGCCTCTTG ATCGCCGTGT TGGTATACAG TGGCCAACTT
ATGTGGATGC GCCGTGCAGT GGTATTGCAA CACCGCCGTG AATTGGCCAG CGCGGAAGAA
AAAGCGCTGC TCAGCGCCAA GGCCAAGCTT GAGCAACTCG TACATGAGCG CACCTCCCAG
CTTGAAAAAA TGGGGGTTTT GCAACGCACC ATTCTGGATG CGGCCTCCTA CGCCATTATC
GCGACAGACA CCGAGGGCAT TATCACAGTG TTTAACCCCT CGGCCGAGCG GCTTCTGGGC
TTTACGGCTA AAGAGATGGT CGGGCTGCAG ACTCCGGCCA TTTTCCACCT TGAAGAAGAG
GTGGTCCGCC GGGCGACGCA GCTCAGTGAA GAATTGGGCA CCAAAATAGA ACCCGGCTTC
GATGCCTTTG TCGCCAAATC GAGGCGGGGC AAAGAAGATA CCAATAACTG GACTTATGTG
AGTAAGAGCG GTGCCCGAAT CACGGTAAAA CTCAGCGTCA CGACCCTCTA TGGTGAAGAT
AAGGACATCA TGGGCTATTT GGGCATTGCC TATGACCTGA CCGAACAGCT AAAGCGTGAG
CAAGAGCTTG CCGATGCCCG CGAGCAGGCG CTGCAGGCAA GCCGTGCCAA GTCTGACTTT
TTGGCCAACA TGAGCCACGA AATTCGCACT CCCATGAATG CCGTACTCGG GCTTTTGCAA
ATGACATTGC AGACCGAACT GCCACCCCGC CCGAGGGATT ATTTAGAAAA AACCCAGCAG
GCCGCCAAAT CTCTGCTGGC GCTGCTGAAT GACATTCTGG ACTTTTCCAA AATTGAAGCG
GGCCGGATAG AACTTGAGCG GCAAGGCTTT TCGCTGCAAC AACTGCTTGG GGATATGGGC
AGCATTCTTT CATCCCAGGT ACAGCAAAAA GACATTGAGC TGGTGTATCA AGTCGCACCG
TCGGTGCCGG ATCAGCTGAT TGGCGACAGC CTGAGGCTCA GGCAAATCTT GCTGAATGTC
CTGACCAACG CCATCAAGTT TACCGAAAAA GGTGACATTA TCACCCGTAT CGATGCCGAT
CTGGGAGACG ATGGCACTTG TCATTTGCAT ATCGAAATCC AGGACTCGGG TATCGGCATG
ACGAATGAGC AGCAGGCAAT TATATTCAAG GGCTTTTCAC AGGCTGACTC CTCCATTTCC
CGTCGCTATG GCGGCACAGG GCTTGGCCTG GCAATTACCC GCGAGCTGGT GCATCTGATG
CAGGGGGAAA TCCGCGTCAC CAGTAGCCCC GGCGTCGGCA GTACCTTCAC TATCGATGTG
CAGCTGGGAT TTGACGCCAC TAAATATCGC CCGGGTGCCC GCTTCAGTGG CGTAAGGGTG
TTGCTGGTGG AAGATAATCA CACTTCCCGT TTGGTGTTCA GCGAGCTGCT GCGTGATCTG
GGATGTGAGG TCACGGCGTT GAATAACGGT TTAACCGCTA TGAAGACGAT AGAGCGCATG
GCACCTGACT CATTTGATGT GCTGCTGGCA GATTGGCAGC TCCCCGGATT GGACGGACTC
GAACTCGCCT CATGGATACG TCATCTGGAC TCACTGAGCA GACAGCCCGG TATTATTATT
GTCACCGCTT TTAGTCAGGC CATGCTCGAA GCGCAGCTCA AGCACAGGGA AGAGGAGTTT
GATGCCACCC TGATTAAACC CGTGACCCGA GAGATGGTTA GCCGTTGCCT GCAAAGTGTG
TTGGAACGCC ACAATAACGA TGGCTTGGAT ATGTTATCTC ATCTGCCGTT GGCTCCGAGT
CTGGTAGGCA GGCGACTGCT GTTGGTGGAA GACAATGCCA CCAATCGCCT GGTTGCCACC
AGTTTACTGG GCCAGCTTGG CGCCGAGGTC ATCGAGGCTG TTGATGGTTT TCAGGCACTG
AAGCTCCTCT CCCGTCAGCA GTTTGATTTA GTGCTGATGG ATATCCAGAT GCCGGGGATG
GATGGTTACC AAACCACCCG TAAAATCCGC AACGAGCTTA TGCTCACCGA CTTGCCTATC
ATTGCCATGA CCGCCAACGC CATGCCGGAA GACAAGCAGG CATGCAGGGA TGCTGGCATG
AACTGCCATA TTTCAAAGCC ATTTGAAATA GACGAGGTGG CGACTAAGTT ACTGCAGTAC
CTCAGTCCTC CCGAGCACCC GATGAGGTCC AGCGAAGCCT TGGCAGAGGA CGAGTCCACC
AGTGCTGGCT CCTTGACAGC GGCGCCCGAG GCGGCAGTAA CCGAGATGCA TAATCCCAAG
GATGCACTGC CGCAGTCAGT CAGACAGTTT TCACAGGCCA ATGGCCTTGA TTTGGAGGAA
GCCTGCAATC GCTTGGGTGA CCGTGAGCTC TTTACCAGGG TCATCGATCA GTTTTTGCTG
GATATAAGCC AGGCACAGCG CTGTCTGTCG GTACCTGAGA TAGCAATGAA AGACGCACGA
ATTCAGTACC ACAGTCTTAA AAGTGGCGCC GCCAGCTGCG GCTTTACCGC ACTCGCCCTG
GTTCTGCGAA ATGCCGAGGC CAATTGTCGC CCCGAGGCCG AGCTGCGTGT GGCGCCCGAT
GAAGCGGTCT TGAGGGCATT GCCAGAGGCT ATCTCGCAGC TTGAGCAGTT ACAGCCATTG
TTGTCGCCTC AGGTCCAAAG TGGAGCGGCA GCCTCACAGA ATCTGTTGCC TCAGGCTGAA
CTGTCGGCAC AGTTAATTAC GCTGCAACAG CTCCTTAGCC AGTCGGATAT GGCAGCGCTG
GATTTGCTGG CAAACCTGCG GGAACCTTTG GCAGAGCTGG ATGCAGCGCT GACCGGGAAG
TTAGTGGATG CAGCAAATAA CTTGGATTTT AATCAATCAC TTGTTCTACT ATCGGCTTTT
GAGGGATTGG AGAGGATAGG ATGA
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| Protein sequence | MPGTHLLPPS LSRQSLFSLW VPILILVLGY VVGSQLAEQQ KLENRYRVQE VMQERLEQIT
TGVTEKVSLY QYGLRGVRGA MLTYGVDNFD YSRMQLYTQS RDYSHEFPGA RGFGFIQYVP
VSALDTFLDS SAMERPDGRF ALRQLNPHDD DLFVIRFIEP EARNKQAVGL DIGSESNRRQ
AALRSARENS VTLTGPITLV QASQKSLQGF LILMPVYRTP DSETSSTTGM ANLVGWSYAP
ILIDEVLNTI SGLEEHLVLT IYDVTDGSAQ QFFQRGAHDV ALTQHQVDAD IGLFGRDWRL
SLSPDPAFIQ RMALPEPSST LLDAWLISLL IAVLVYSGQL MWMRRAVVLQ HRRELASAEE
KALLSAKAKL EQLVHERTSQ LEKMGVLQRT ILDAASYAII ATDTEGIITV FNPSAERLLG
FTAKEMVGLQ TPAIFHLEEE VVRRATQLSE ELGTKIEPGF DAFVAKSRRG KEDTNNWTYV
SKSGARITVK LSVTTLYGED KDIMGYLGIA YDLTEQLKRE QELADAREQA LQASRAKSDF
LANMSHEIRT PMNAVLGLLQ MTLQTELPPR PRDYLEKTQQ AAKSLLALLN DILDFSKIEA
GRIELERQGF SLQQLLGDMG SILSSQVQQK DIELVYQVAP SVPDQLIGDS LRLRQILLNV
LTNAIKFTEK GDIITRIDAD LGDDGTCHLH IEIQDSGIGM TNEQQAIIFK GFSQADSSIS
RRYGGTGLGL AITRELVHLM QGEIRVTSSP GVGSTFTIDV QLGFDATKYR PGARFSGVRV
LLVEDNHTSR LVFSELLRDL GCEVTALNNG LTAMKTIERM APDSFDVLLA DWQLPGLDGL
ELASWIRHLD SLSRQPGIII VTAFSQAMLE AQLKHREEEF DATLIKPVTR EMVSRCLQSV
LERHNNDGLD MLSHLPLAPS LVGRRLLLVE DNATNRLVAT SLLGQLGAEV IEAVDGFQAL
KLLSRQQFDL VLMDIQMPGM DGYQTTRKIR NELMLTDLPI IAMTANAMPE DKQACRDAGM
NCHISKPFEI DEVATKLLQY LSPPEHPMRS SEALAEDEST SAGSLTAAPE AAVTEMHNPK
DALPQSVRQF SQANGLDLEE ACNRLGDREL FTRVIDQFLL DISQAQRCLS VPEIAMKDAR
IQYHSLKSGA ASCGFTALAL VLRNAEANCR PEAELRVAPD EAVLRALPEA ISQLEQLQPL
LSPQVQSGAA ASQNLLPQAE LSAQLITLQQ LLSQSDMAAL DLLANLREPL AELDAALTGK
LVDAANNLDF NQSLVLLSAF EGLERIG
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