| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0698 |
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| Symbol | |
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| ID | 4602951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 861843 |
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| End bp | 863288 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780033 |
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| Product | Outer membrane protein-related peptidoglycan-associated (lipo)protein |
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| Protein accession | YP_926576 |
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| Protein GI | 119773836 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAAA ATACGTTAAT ATTTGTATCA CTTCTCGCCA GCTTAGCCAC ATCTGTTAAT
GCTGCGAGCT TATTTGGTCC ATTCCCTAAT GCAAAGTATC CCGAAGAAAA ACGCATCCAT
TTCACGCCTT TTCACATCAT CACGGCCGTC AGTAACCAGG GCTTCACGCT TAAGCCGGTT
TCAGGGCGCC TGACCCACAA CTCATTTGAA CTTCCGGACA GCTATCCGCT GGCACTGGTA
ATGAATAACT ATCTGGCGCA GTTTAAAAAC CTCAATGCCG AGGTGTTATT TCAATGTGAG
GCTGAAGGCT GCGGCGATGG CTGGGCCATG CGGGACCAGC TGGCACCCCT GATAACAGTG
GATACCAGTT ATCCCGGCGC TTACGTCGCA GCAAAGCTTA AAGGTGCGGG CGGAGATGTC
TACAGCAGCA TCTACGCCTT TCACCGTGAG GGCAGTTACA CCAAGGTGCA GCTGGTTACC
CTTGAAGTCA TCCCGGAACC GCTGGATCTT GTTGAGGCAA ACAGCAATTT TTTGCAGCAG
GGCACACAGG ATGTGGCGAT GGCTGACAGA CGCAGTGACG ATGCCCAGGA CTCAGCCGAT
CATCCGTTGC TTGGGCGCAT GCCAGGCAAT TATATCACGC GTTACAAACA AACCAATCTT
ACCCAGGTTC CGGTCATAGT AGGCATCTCA GCAGCCGGCA TTCAGACCCA ATCTCTGGAC
GCCAGGCTCA CTGAAATTCG TTATCAGATG CCCGAGCGTT ACTCGCTGTT TGAAATTAAC
AGCAATTACG CCGCTGCTGC ACAAAAGCTT AACGCAGAGC AGGTGTTTTA CTGCAAAGGC
ACTGGCTGTG GCGATGATGA TGCGCTTATC AAAGCCATGG GATTGTTCCA GGATGATGCC
GAAGATCAGT GGCAGGAATA TCAGCTGTAT AGATTGAGCC GCCCTCAGGG TGATGTGTAT
TTCGATATCT ATTCCCAGGG CCGTTACGAC GCAACACCGG GGGATACCAC GCTCAGAGTT
ATGGAGCTGT CTGTCCTGAA AACGGACAGG ATCGCCATCA ATCTCGACGC CCTCAATGAC
GCCATCACAC AAACCGGCAA GGCAACCCTG GATGGTTTGC TGTTCGACTT CGACAGCGAC
CGGATGCTGC CTGAATCCCA GCCGGTGCTG GAGGTGCTGG CAACCTATCT TAAACAGCAC
CCGGCTAAAG GCTTTTACGT GGTTGGCCAT ACCGATGACA AGGGAGAGCG CGCCTACAAC
CAAAGTCTGT CGTTGCGCCG CGCCGATGCC GTTATTCAAA GCCTCACGCA GCAATATCAC
ATCCCGGCGT CACAATTAAC CGCCCATGGC AACGGGGAAT ATAGCCCGGT GGCGAGTAAT
GAAAACGAGT CAGGCCAGGC ACTCAACCGC AGAGTGGAAT TGGTGCTGCG TTCGGACATG
GAATAG
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| Protein sequence | MGQNTLIFVS LLASLATSVN AASLFGPFPN AKYPEEKRIH FTPFHIITAV SNQGFTLKPV
SGRLTHNSFE LPDSYPLALV MNNYLAQFKN LNAEVLFQCE AEGCGDGWAM RDQLAPLITV
DTSYPGAYVA AKLKGAGGDV YSSIYAFHRE GSYTKVQLVT LEVIPEPLDL VEANSNFLQQ
GTQDVAMADR RSDDAQDSAD HPLLGRMPGN YITRYKQTNL TQVPVIVGIS AAGIQTQSLD
ARLTEIRYQM PERYSLFEIN SNYAAAAQKL NAEQVFYCKG TGCGDDDALI KAMGLFQDDA
EDQWQEYQLY RLSRPQGDVY FDIYSQGRYD ATPGDTTLRV MELSVLKTDR IAINLDALND
AITQTGKATL DGLLFDFDSD RMLPESQPVL EVLATYLKQH PAKGFYVVGH TDDKGERAYN
QSLSLRRADA VIQSLTQQYH IPASQLTAHG NGEYSPVASN ENESGQALNR RVELVLRSDM
E
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