Gene Sama_0683 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0683 
Symbol 
ID4602936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp844362 
End bp844652 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content53% 
IMG OID639780018 
Producthypothetical protein 
Protein accessionYP_926561 
Protein GI119773821 
COG category[R] General function prediction only 
COG ID[COG2329] Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGCCG TTATTTTCAA AGCCACTGTC AGCAAACTCG ATAACCAATA CAGCGCCATG 
GCCGCCGAAC TCAGAAAGCT CGCCTTTGAG AAATACAATT GCCGGGATTT TATTGCCGTC
ACAGAAGGAG AGCAGGAAAT CGCCATCTCC TACTGGGACA GCGAAGCCGA TATCATCGCC
TGGAAGCAGG ACGCGCTGCA CAGGGTCGCC CAGCAAACAG GTGCCGAACG CTGGTATCAG
AATTATCAGG TAGAAGTGCT GGAGCTCAAG CGCAGTTACC GTGCTGGCTG A
 
Protein sequence
MFAVIFKATV SKLDNQYSAM AAELRKLAFE KYNCRDFIAV TEGEQEIAIS YWDSEADIIA 
WKQDALHRVA QQTGAERWYQ NYQVEVLELK RSYRAG