| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0618 |
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| Symbol | |
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| ID | 4602871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 771262 |
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| End bp | 772824 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639779953 |
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| Product | alkyl hydroperoxide reductase, F subunit |
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| Protein accession | YP_926496 |
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| Protein GI | 119773756 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3634] Alkyl hydroperoxide reductase, large subunit |
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| TIGRFAM ID | [TIGR03140] alkyl hydroperoxide reductase, F subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.309291 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAACG CGGATTTGAA ACAGCAACTT AAGACCTATC TGCAAAATCT ACGGCAAGAC
GTCAGACTCG TGGTGTCTGC CGATGACAGC AAAAAATCTC AGGAATTGCT CGACCTGGCC
AATGACATCT CCTCCTTGTC TCCGTTGGTT TCAGTGACCC AGGCCAGGCT CGAGCGCACC
CCTGAAATGC AGGTAACCAA TGCTCAGGGG ACCGACATTC GTTTTGCCGG TTTGCCCATG
GGCCACGAAT TTACGTCGTT GGTGTTGGCA CTGCTGCACA CAGGCGGTCA TCCCCTCAAG
CTGGATATGG CTGTTATTGA ACAAATCAAG GCGCTGCCAC AGACCCTGAA GTTTGAAACC
TTTATCTCCC TGAGCTGCCA AAACTGTCCC GATGTGGTGC AGGCTCTGAA CATGATGGCC
GCGCTGAATC CGAACGTCAG CAGCACCATG ATTGATGGGG CCCTGTTTCA GGACGAGGTG
GAATCTCGGC AGATCATGGC CGTACCCTCG GTGTTCCTTA ATGGTGAACT CTTTTCCCAG
GGTCGCATCA GCCTGAAGGA GATTCTCGCC AAGGTGGATA CCCAGGCTGC AGCCCGAGAA
GCCGATGCCC TGAGTGAGAA AGCCCCTTAC GAAGTATTGG TAGTGGGCGC AGGCCCCGCC
GGTGCCTCTG CCGCCATTTA TTCGGCCCGT AAAGGCTTGC GTACCGGTCT GGTTGCCGAC
CGATTTGGCG GTCAGGTGGC TGAAACCGTG GGCATTGAGA ACTTTATTTC AGTGAAAGCC
ACTGAAGGCC CCAAGCTGGT GGCAAACCTT GAAGCCCACG TTCGCGATTA CGAAGTGGAT
GTGATGGAAA ACCAGAAGGC TCTCAAGCTG ACCAAAGACG GTCTGTATCA GGTGGAGTTG
GCCAATGGTG CTGTGTTATC GGGTAAAACT GTACTGATTG CCACCGGTGC ACGCTGGCGT
GAAATGAATG TGCCCGGTGA AAAAGAATAC CGTGGCCGCG GCGTGGCTTA CTGTCCTCAC
TGTGATGGCC CCTTGTTCAA AGGTAAACGC GTTGCCGTGA TAGGTGGCGG TAATTCGGGT
ATCGAAGCTG CCATCGACCT GGCCAACATA GTTGAGCATG TCACTGTGCT GGAGTTTGAC
AGCAAGCTGC GCGCCGATGA GGTGCTGGTT CGCAAGGCTC GCTCTATGGG GAATATCCAC
ATCATCACCC AGGCACAAAC CACCGAGGTG GTGGGTGACG GCAACAAGGT GACCGGCTTG
GTCTACACCG ACCGAGCTAC AGGTGATGTA CACAGTGTTG AGCTGGCGGG TATCTTCGTA
CAGATTGGTC TTGTACCCAA CTCAGAGTGG CTTAAGGGCA CACTGGAACT GACCCCGCGC
GGCGAGATCA TAGTGGATGA GCGTGGCCAA ACCTCGCTGC CGGGTGTATT TGCCGCGGGA
GACGTGACCA ACTCTGCCTA CAAGCAAATC ATTATTGCCA TGGGCAGTGG TGCTACCGCG
AGCCTGGGGG CGTTTGATTA CCTCATCCGT CACAGCGAGG CAGATGCTTC AGCTGCCGCC
TGA
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| Protein sequence | MLNADLKQQL KTYLQNLRQD VRLVVSADDS KKSQELLDLA NDISSLSPLV SVTQARLERT
PEMQVTNAQG TDIRFAGLPM GHEFTSLVLA LLHTGGHPLK LDMAVIEQIK ALPQTLKFET
FISLSCQNCP DVVQALNMMA ALNPNVSSTM IDGALFQDEV ESRQIMAVPS VFLNGELFSQ
GRISLKEILA KVDTQAAARE ADALSEKAPY EVLVVGAGPA GASAAIYSAR KGLRTGLVAD
RFGGQVAETV GIENFISVKA TEGPKLVANL EAHVRDYEVD VMENQKALKL TKDGLYQVEL
ANGAVLSGKT VLIATGARWR EMNVPGEKEY RGRGVAYCPH CDGPLFKGKR VAVIGGGNSG
IEAAIDLANI VEHVTVLEFD SKLRADEVLV RKARSMGNIH IITQAQTTEV VGDGNKVTGL
VYTDRATGDV HSVELAGIFV QIGLVPNSEW LKGTLELTPR GEIIVDERGQ TSLPGVFAAG
DVTNSAYKQI IIAMGSGATA SLGAFDYLIR HSEADASAAA
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