Gene Sama_0605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0605 
Symbol 
ID4602858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp757502 
End bp757963 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content53% 
IMG OID639779940 
ProductDNA-binding transcriptional regulator AsnC 
Protein accessionYP_926483 
Protein GI119773743 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.132523 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATACAT CATTTCAGCG CGATCAGTTG GACAACCAGA TCCTCGAGGC CCTGATGGCC 
GATGCCCGCA CCCCCTTTGC TGAATTGGCA AAACGTTTTG GGGTCAGCGC CGGCACCATT
CACGTTCGGG TCGAAAAGAT GAAGCAGGCA GGCATCATCA CCGGCGCCCA AATCACTGTT
AACCCTAAAG CGCTGGGTTA CGATGTTTGT TGCTTTATCG GCATTAACCT TAAAAGCGCC
GGTGACTACC CGGCCGCCAT CTCAAAACTC AATGCTCTGG AAGAAGTGGT GGAAGCCTAC
TACACCACCG GCAATTACAG CATCTTCGTG AAAGTCATGT GCCAGTCCAT CGACAGTCTG
CAGCATGTGC TGATTAATCG CATCCAGTCC ATCGCCGAAA TTCAGTCAAC CGAGACCCTG
ATCAGCCTGC AAAACCCCAT AGTAAGGGCG GTAAAACCCT GA
 
Protein sequence
MDTSFQRDQL DNQILEALMA DARTPFAELA KRFGVSAGTI HVRVEKMKQA GIITGAQITV 
NPKALGYDVC CFIGINLKSA GDYPAAISKL NALEEVVEAY YTTGNYSIFV KVMCQSIDSL
QHVLINRIQS IAEIQSTETL ISLQNPIVRA VKP