Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0605 |
Symbol | |
ID | 4602858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 757502 |
End bp | 757963 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639779940 |
Product | DNA-binding transcriptional regulator AsnC |
Protein accession | YP_926483 |
Protein GI | 119773743 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.132523 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGATACAT CATTTCAGCG CGATCAGTTG GACAACCAGA TCCTCGAGGC CCTGATGGCC GATGCCCGCA CCCCCTTTGC TGAATTGGCA AAACGTTTTG GGGTCAGCGC CGGCACCATT CACGTTCGGG TCGAAAAGAT GAAGCAGGCA GGCATCATCA CCGGCGCCCA AATCACTGTT AACCCTAAAG CGCTGGGTTA CGATGTTTGT TGCTTTATCG GCATTAACCT TAAAAGCGCC GGTGACTACC CGGCCGCCAT CTCAAAACTC AATGCTCTGG AAGAAGTGGT GGAAGCCTAC TACACCACCG GCAATTACAG CATCTTCGTG AAAGTCATGT GCCAGTCCAT CGACAGTCTG CAGCATGTGC TGATTAATCG CATCCAGTCC ATCGCCGAAA TTCAGTCAAC CGAGACCCTG ATCAGCCTGC AAAACCCCAT AGTAAGGGCG GTAAAACCCT GA
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Protein sequence | MDTSFQRDQL DNQILEALMA DARTPFAELA KRFGVSAGTI HVRVEKMKQA GIITGAQITV NPKALGYDVC CFIGINLKSA GDYPAAISKL NALEEVVEAY YTTGNYSIFV KVMCQSIDSL QHVLINRIQS IAEIQSTETL ISLQNPIVRA VKP
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