Gene Sama_0582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0582 
Symbol 
ID4602835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp726973 
End bp727401 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content47% 
IMG OID639779917 
Producthypothetical protein 
Protein accessionYP_926460 
Protein GI119773720 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00151271 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00238722 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACGAT TAATCATCAG TTTGATAGCT TGGTTACTCG TCTGCTTTCC TGTCAGAGCA 
GACGATGCCC TGTATGTGGT GGTGAATACG ACAAACGGCA TTGAAAATTT GAGTCATCAT
GAAGTGGTAG ATATTTTTAT GGGACGCGAC CGAACGTTTC CGGACGGAAA CAAGGTCACA
GTATTCGATA ACAGCAGTGA CACCGAGACC CGGGCATTAT TCTACAGACA GCTGGTCAAT
CGCAGCCTGG CACAGGTAAG CAGTTACTGG GCACGATTGC AGTTTTCGGC ACGAGTCACA
CAACCCAGGG AAATAGGCCA GCGGCAAGCC TTGCTTGAGT TGATGAACAG CACCCCCTCA
GGTATTACTT TTGTCAAAAG CACTGAACTG GACCCGGCAT TAAAGGTGGT ATACAAATTT
GATCCCTAA
 
Protein sequence
MKRLIISLIA WLLVCFPVRA DDALYVVVNT TNGIENLSHH EVVDIFMGRD RTFPDGNKVT 
VFDNSSDTET RALFYRQLVN RSLAQVSSYW ARLQFSARVT QPREIGQRQA LLELMNSTPS
GITFVKSTEL DPALKVVYKF DP