Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0582 |
Symbol | |
ID | 4602835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 726973 |
End bp | 727401 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 639779917 |
Product | hypothetical protein |
Protein accession | YP_926460 |
Protein GI | 119773720 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00151271 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00238722 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACGAT TAATCATCAG TTTGATAGCT TGGTTACTCG TCTGCTTTCC TGTCAGAGCA GACGATGCCC TGTATGTGGT GGTGAATACG ACAAACGGCA TTGAAAATTT GAGTCATCAT GAAGTGGTAG ATATTTTTAT GGGACGCGAC CGAACGTTTC CGGACGGAAA CAAGGTCACA GTATTCGATA ACAGCAGTGA CACCGAGACC CGGGCATTAT TCTACAGACA GCTGGTCAAT CGCAGCCTGG CACAGGTAAG CAGTTACTGG GCACGATTGC AGTTTTCGGC ACGAGTCACA CAACCCAGGG AAATAGGCCA GCGGCAAGCC TTGCTTGAGT TGATGAACAG CACCCCCTCA GGTATTACTT TTGTCAAAAG CACTGAACTG GACCCGGCAT TAAAGGTGGT ATACAAATTT GATCCCTAA
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Protein sequence | MKRLIISLIA WLLVCFPVRA DDALYVVVNT TNGIENLSHH EVVDIFMGRD RTFPDGNKVT VFDNSSDTET RALFYRQLVN RSLAQVSSYW ARLQFSARVT QPREIGQRQA LLELMNSTPS GITFVKSTEL DPALKVVYKF DP
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