| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0540 |
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| Symbol | |
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| ID | 4602795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 665610 |
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| End bp | 666200 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639779876 |
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| Product | FxsA cytoplasmic membrane protein |
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| Protein accession | YP_926420 |
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| Protein GI | 119773680 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3030] Protein affecting phage T7 exclusion by the F plasmid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0336938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00333151 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTTTTTG CTTTTGTTCT GATCTTTATC CTGATCCCCG TGGTCGAGCT CTCGGTGCTG
ATTCGGGTTG GCGAAGCGCT CGGCAGCCTG ACCACAGTGG CACTGGTGCT CTTCACCGCA
GTAGTAGGGG TATCCCTGGT TCGCAGTCAG GGATTGTCGA CCCTGATGCA GGCGCAGCAG
AAAATGGCCC GGGGTGAGGC GCCTACGTCT GAATTGGTAC AGGGCATGAT GCTGGCCATG
GCCGGAGTCC TGCTGCTGAT ACCGGGCTTT GTCACCGACT TTATTGGTTT GCTCCTGCTC
ACGCCCATTA CCCGTAAACC CCTGGCAGCT TTGCTGCTGA AGCGCTTGCA ACTGAAAGTG
GTGGGTCAGG GTGGCTTTGG TGCCAATTCT CAGGGGCCTT TTGGTCAGGG GCCGTTTGGC
CAGGGACCTT TTGGTAACGA CCCCTTCAAT CGCCAGGGTG GCAACACCTT CGATGGCGAC
TTTGAACGCA AAGATGACCC CATGGCGCAA AGTCATCAGC TGAACCAGCC CAAAAATCCG
GCCAGTGAAG ATGATACTGC GCAGTCTGAC ACCCACAAGC CCAGAGACTG A
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| Protein sequence | MFFAFVLIFI LIPVVELSVL IRVGEALGSL TTVALVLFTA VVGVSLVRSQ GLSTLMQAQQ
KMARGEAPTS ELVQGMMLAM AGVLLLIPGF VTDFIGLLLL TPITRKPLAA LLLKRLQLKV
VGQGGFGANS QGPFGQGPFG QGPFGNDPFN RQGGNTFDGD FERKDDPMAQ SHQLNQPKNP
ASEDDTAQSD THKPRD
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