| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0538 |
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| Symbol | dipZ |
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| ID | 4602793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 663245 |
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| End bp | 665068 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639779874 |
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| Product | thiol:disulfide interchange protein precursor |
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| Protein accession | YP_926418 |
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| Protein GI | 119773678 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4232] Thiol:disulfide interchange protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.126162 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00471183 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAAAAAA TCATCACCCT GCTGTTTAGT TGTCTGCTGT TATTGGCCCC ATCGACCCAT
GCCAATGATA TTTTTGGTAA AAAATTCGAT TTCCTCAAGG GCGAGCCCGA GCTGATGCCC
GTGAATGAAG CCTTTGTGTT TGATGCCGTC CAGGACGGGA ATCGGGTGCG GGTGTCCTTT
GTGATTGCCG ATGGCTATTA CCTTTACCGC GACAAACTCA AGTTTGAAGC CGACAACGCC
ACCCTGGGTG AGGTCGCGCT GCCGCCGGGT AAGCTGCACA ACGACGAGTA CTTTGGCGAG
CAGCAGGTAT TTTACAGCTA TGTTGAGTTT ACCGTTGCCC TCAAAGAAGC CATGGATCAG
GGTACACTGA CCCTCACCTT CATGGGCTGC GCCGAAGGCA AACTCTGCTT CCCACCCACC
AGGGTCAGCA AGCAGCTTAC CGCTGTGGCC CCCAACGATG GCAAGCTGTC AGGCGAATCC
GCAAAACCTG TATCTGACGG CACAGTATCA GGCACTTCAA CCTCTGCACC TCTGACCCAA
CAGGACAGTC TGGCGCAGAT GCTGACCGAA GGAAACCTCG GTTGGACCTT GCTGATTTTC
TTCGGTTTGG GCATTGGTTT AGCGCTTACG CCCTGCGTAT TCCCCATGTA CCCTATTCTG
TCGGGCATTA TCGTCGGTCA GGGTGAAAAG TTATCCACGG GCCGCGCCTT TACCCTGTCC
ATGGCCTATG TGCAAGGTAT GGCGATTACC TATTCGCTGC TGGGTTTGGT GGTGGCGTCG
GCAGGGATGA AATATCAAGC CGCGCTGCAA CACCCAGCGG TACTGATTGG TCTGGCGATA
CTCTTCTTCG TCCTCAGCCT GTCTATGTTT GGCCTGTATG ACCTCAAATT GCCCTCTTCC
TGGCAGGAAA AGATGAATGG CCTGTCCAAC AACCAGAAAG GTGGCAACCT CACCGGCGTC
TTCATTATGG GGGTGATCTC CGGTCTGGTG GCATCGCCAT GCACCACGGC CCCCTTGTCG
GGCGCTCTGG TGTACGTGGC GCAAAGTGGC GACCTGCTGA TGGGCTTTGC CGCCCTGTAC
GTGCTTAGTA TGGGCATGGG TCTGCCATTG CTGCTGATGG GCACTTCCGG TGGTAAATTG
CTGCCCCGCG CAGGCGCCTG GATGGAAATC ATCAAGACTG TGTTTGGCTT CCTGTTAATT
GCGGTATCTG TGATGATGAT TGGTCGTATC TGGCCAGGTA TGGTGTCCGA TTTGCTGTGG
GCTCTGTGGG GCGTAGCACT TGCGGGCTAT CTGCTGCATC AAAACAAAAA GACCGAATTC
AACTGGAAAC AAACCGTGCG CACTGTGCTG CTGATGCTCG GACTGCTGGC CGCATTCTCT
TACGGCTTCC AGGCTGTGAT GGGCGGTTTG GGCTATCAGA TGCCCACCAA CAATACTGCA
CAACAATCCG TAAAAGGGGT TGAATTCAAG CGCATCAAGT CAGTAGAAGA TCTCAATGCC
GAGCTGGCCA TAGCCCGCTT TGAAGGCAAG TTTGTGATGC TGGACCTCTA CGCCGACTGG
TGTGTGGCCT GTAAGGAATT TGAGCACATT ACGTTCCCTG ATCCGGAAGT GAAAAAGCGC
CTGGATAACA TGGTGCTGCT TCAGGCCGAT GTGACCAAGT CTGACGCCAT CGACGTAACC
TTGCTGGAGA CCTACGATGT GCTTGGTCTG CCGACACTGC TGCTGTTCGA TCCCCAGAGC
GGCCTGCGTG ATGACTTAAG AGTCACCGGC TTTATGGGCC CCAAAGACTT TGCGGCGCAC
CTGGACCTGC TGCAAGTGCA TTAA
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| Protein sequence | MKKIITLLFS CLLLLAPSTH ANDIFGKKFD FLKGEPELMP VNEAFVFDAV QDGNRVRVSF
VIADGYYLYR DKLKFEADNA TLGEVALPPG KLHNDEYFGE QQVFYSYVEF TVALKEAMDQ
GTLTLTFMGC AEGKLCFPPT RVSKQLTAVA PNDGKLSGES AKPVSDGTVS GTSTSAPLTQ
QDSLAQMLTE GNLGWTLLIF FGLGIGLALT PCVFPMYPIL SGIIVGQGEK LSTGRAFTLS
MAYVQGMAIT YSLLGLVVAS AGMKYQAALQ HPAVLIGLAI LFFVLSLSMF GLYDLKLPSS
WQEKMNGLSN NQKGGNLTGV FIMGVISGLV ASPCTTAPLS GALVYVAQSG DLLMGFAALY
VLSMGMGLPL LLMGTSGGKL LPRAGAWMEI IKTVFGFLLI AVSVMMIGRI WPGMVSDLLW
ALWGVALAGY LLHQNKKTEF NWKQTVRTVL LMLGLLAAFS YGFQAVMGGL GYQMPTNNTA
QQSVKGVEFK RIKSVEDLNA ELAIARFEGK FVMLDLYADW CVACKEFEHI TFPDPEVKKR
LDNMVLLQAD VTKSDAIDVT LLETYDVLGL PTLLLFDPQS GLRDDLRVTG FMGPKDFAAH
LDLLQVH
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