| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0522 |
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| Symbol | |
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| ID | 4602777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 643103 |
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| End bp | 643774 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639779858 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_926402 |
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| Protein GI | 119773662 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.211294 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAAA TAAAAGTGGC AATCGCAGAT GACCACCCAC TATTTCGCGC AGCATTAACT
CAGGCAGTGC TCAAAAATGT GAATACGGCA GAGGTATTGG AGGCCGAAAA CTTTCAGGAG
CTCATCCGGG TCATTGAAAG TCATCCCGAT ATTGAACTGG TATTTCTTGA CCTGCATATG
CCTGGCAATG AAGGGTTTAC CGGATTAACT CTGTTGCAGA ACCATTTCCC CGATATCGTA
GTGATTATGG TGTCATCGGA CGATCAGCCC GACATCATTC GCAAGGCTAT TAACCTGGGC
GCCAGCGCCT TTATTCCCAA GTCGGCCAAC CTCAATCAAA TAGCCGATGC CATAGGCACA
GTGCTGGACG GTGAGGTGTG GTTGCCTGAT AACACAGATA TCAATGTCGA CCAACAGACG
GCGGCAGAGC ATCAGCGACT GGCCAAACAA CTTGCCCAGC TGACGCCACA GCAATACACA
GTGCTTGCCA GCATTGCCAA TGGCCAGCTT AATAAGCAAA TTGCTTACGA TCTCAATATC
AAGGAAACCA CGGTCAAAAA GCATGTGTCG GCCATCCTGT TGAAACTGGA AGTTTACAAT
CGCACCCAGG CAGGGCTGGT GTTTCAGCAA TTGATGATCA CCAGCAGCGA CAAGCAGACG
GCGACGGCCT GA
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| Protein sequence | MSQIKVAIAD DHPLFRAALT QAVLKNVNTA EVLEAENFQE LIRVIESHPD IELVFLDLHM
PGNEGFTGLT LLQNHFPDIV VIMVSSDDQP DIIRKAINLG ASAFIPKSAN LNQIADAIGT
VLDGEVWLPD NTDINVDQQT AAEHQRLAKQ LAQLTPQQYT VLASIANGQL NKQIAYDLNI
KETTVKKHVS AILLKLEVYN RTQAGLVFQQ LMITSSDKQT ATA
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