| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0514 |
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| Symbol | |
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| ID | 4602769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 631612 |
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| End bp | 634440 |
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| Gene Length | 2829 bp |
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| Protein Length | 942 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639779850 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_926394 |
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| Protein GI | 119773654 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAAGA TTGAAATCCG CGGGGCCCGC ACCCACAACC TCAAGAATAT CAACCTGACA
ATTCCCAGAG ACAAGCTGAT TGTGATCACA GGTCTCTCGG GGTCAGGCAA GTCGTCGCTG
GCGTTTGATA CCCTCTACGC CGAAGGTCAG CGCCGCTATG TGGAGTCCCT CTCTGCCTAC
GCCCGCCAGT TTTTGAGCCT GATGGAAAAG CCCGATGTGG ACCATATCGA GGGTCTGAGC
CCGGCCATTT CCATCGAGCA GAAATCCACC TCCCATAACC CTCGCTCCAC CGTGGGTACC
ATTACCGAGG TGTACGATTA TTTACGTCTG CTGTTTGCCC GCGTTGGCGA ACCACGCTGC
CCGACCCACG GCCAGCCACT GGCGGCCCAG ACCGTGAGCC AGATGGTCGA CAAGGTGCTG
GAACGCCCCG AGGGCGAAAA ACTGATGCTG CTGGCGCCTG TGGTCAAGGC CCGCAAGGGT
GAACACGTTA AGCTGCTCGA CAGCCTGTCG GCCCAGGGCT ATATCCGCGC CCGTATCGAT
GGTGAGGTAT GCGATCTATC CGATCCGCCA ACCCTGGATC TGCACGTGAA GCACACAATC
GAAGTGGTGG TGGACCGCTT CAAGGTCAAA GACGACATGC AGCAGCGTCT GGCAGAATCC
TTTGAGACCA CCCTTGAGCT GTCCGGCGGC ATCGCCGTGG TGGCCAGCAT GGAAGAAGGC
GCTGCCGAAG AGATGATTTT CTCGGCCAAC TTTGCCTGCC CCCATTGCGG TTATTCCATG
GCCGAACTGG AGCCACGGAT TTTTTCCTTC AACAATCCCG CCGGCGCCTG CCAGACCTGT
GATGGCCTGG GCGTACAGCA ATTTTTTGAC CCTGAGCGGG TCATAGTCTC CGGTGAGCTG
TCGCTGGCGG GCGGCGCCGT TCGCGGCTGG GACAGACGTA ACTTCTATTA TTTCCAGATG
CTCAAGTCCC TCGCCGAACA TTATGAGTTC GATGTGGAGG CCCCCTTCAG TGAGCTGACC
GCCAAGGTGC AAAAGATAGT GCTTTACGGC TCTGGCAAAG AAGAGGTGGC CTTCCGCTAT
GTGAACGATC GCGGCGATGT GGTGGTGCGC AAACACCCCT TCGAAGGTAT TCTCAACAAC
ATGGACAGAC GCTACCGCGA GACCGAATCC AATACGGTGC GCGAAGAGCT GGCCAAGTAC
ATCAGCAATC AGGCCTGCAG CAGCTGTGGC GGCTCGCGCC TGCGGGAAGA AGCCCGCCAT
GTGTTTATTG AAGATCTCAA CCTGCCGACC CTGACCCACT GGTCCATCGG CGAGGCCATG
GATTACTTCA ACAAGCTGGA ATTTGAAGGG CAAAAGGCCC AGATCGCCGA GAAAATCCTC
AAAGAAGTGC GCGATCGTCT GGGCTTCCTG GTTAACGTGG GACTCAACTA CCTGAGTCTG
GCACGTTCGG CCGAAACCCT CTCCGGCGGC GAAGCCCAGC GTATTCGTCT GGCAAGCCAG
ATTGGCGCCG GTCTGGTTGG CGTGATGTAC GTGCTGGATG AGCCCTCCAT CGGCCTGCAT
CAGCGGGACA ACGAGCGGCT GCTGAACACC CTGACTCACC TTCGGGATCT CGGCAATACC
GTGATTGTGG TGGAGCACGA CGAAGACGCC ATCCGCATGG CCGACCATAT TATCGATATA
GGCCCGGGCG CCGGTGTTCA TGGCGGCGAA GTGATTTGCG ACGGCGATTT GGCCGCCATC
ACCGCCTGCG AGCACTCAGT CACCGGCCAG TACATTTCCG GCAAGCGCAA AATCCAGGTG
GACGGCGGTC GTACCCCCAT CAACCCGGAA CAGCTGATTG AGCTCAGGGG CGCCCGTGGT
AATAACCTCA AGAATGTCGA CCTCAGCATT CCGGTTGGCC TATTTACCTG CGTGACCGGG
GTGTCAGGTT CGGGTAAATC CACCCTGATC AACGACACCT TTTTCAAGAT TGCCCACAAG
GCGCTCAATG GTGCCACAGT GGATGAGCCC GCACCTTACA CCAGCATCAC AGGGCTTGAG
CAGTGCGACA AGGTGGTGGA TATCGATCAG AGCCCCATCG GCCGCACCCC ACGGTCCAAC
CCTGCTACTT ACACGGGCAT TTTCACCCCC ATCCGGGAAC TCTTTGCCGG TACCCAGGAG
TCCCGCACCC GGGGTTATCA GGTGGGCCGT TTCTCCTTTA ACGTCAAGGG CGGTCGCTGC
GAGGCCTGTC AGGGTGATGG GCTTATCAAG GTAGAGATGC ACTTTTTACC GGATGTGTAT
GTGCCCTGCG ACTCCTGTAA GGGCAAACGT TACAACCGCG AAACCCTGGA AGTGAAATAC
AAGGGCAAGA ACATCCACGA AGTGCTGCAG ATGACCGTGG AAGACGCCCG GACGTTTTTC
GATGCCGTGC CCGCCATCGC CCGCAAGCTG CAAACTCTGA TGGATGTTGG CCTGTCATAC
ATTCGTCTCG GCCAAAGCGC CACCACCCTG TCGGGCGGAG AGGCTCAGCG GGTAAAACTG
GCCAAGGAGC TGTCGAAACG GGATACGGGC AAAACCCTGT ATATTCTCGA TGAGCCGACA
ACGGGTCTGC ACTTTGCTGA TATTCAGCTG CTGCTGGACG TACTGCACCG ACTCAAGTCC
CATGGCAACA CCATAGTGGT GATTGAACAC AATCTGGATG TCATCAAGAC AGCCGACTGG
ATTGTGGATT TGGGCCCCGA AGGCGGCTCT GGCGGGGGCA CCATTTTGGT GGCTGGCACA
CCAGAAGACG TAGCCGAGCA TCCCACCTCT CACACAGCGC GCTTCTTAAA GCCGCTGCTG
CAACGCTAG
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| Protein sequence | MDKIEIRGAR THNLKNINLT IPRDKLIVIT GLSGSGKSSL AFDTLYAEGQ RRYVESLSAY
ARQFLSLMEK PDVDHIEGLS PAISIEQKST SHNPRSTVGT ITEVYDYLRL LFARVGEPRC
PTHGQPLAAQ TVSQMVDKVL ERPEGEKLML LAPVVKARKG EHVKLLDSLS AQGYIRARID
GEVCDLSDPP TLDLHVKHTI EVVVDRFKVK DDMQQRLAES FETTLELSGG IAVVASMEEG
AAEEMIFSAN FACPHCGYSM AELEPRIFSF NNPAGACQTC DGLGVQQFFD PERVIVSGEL
SLAGGAVRGW DRRNFYYFQM LKSLAEHYEF DVEAPFSELT AKVQKIVLYG SGKEEVAFRY
VNDRGDVVVR KHPFEGILNN MDRRYRETES NTVREELAKY ISNQACSSCG GSRLREEARH
VFIEDLNLPT LTHWSIGEAM DYFNKLEFEG QKAQIAEKIL KEVRDRLGFL VNVGLNYLSL
ARSAETLSGG EAQRIRLASQ IGAGLVGVMY VLDEPSIGLH QRDNERLLNT LTHLRDLGNT
VIVVEHDEDA IRMADHIIDI GPGAGVHGGE VICDGDLAAI TACEHSVTGQ YISGKRKIQV
DGGRTPINPE QLIELRGARG NNLKNVDLSI PVGLFTCVTG VSGSGKSTLI NDTFFKIAHK
ALNGATVDEP APYTSITGLE QCDKVVDIDQ SPIGRTPRSN PATYTGIFTP IRELFAGTQE
SRTRGYQVGR FSFNVKGGRC EACQGDGLIK VEMHFLPDVY VPCDSCKGKR YNRETLEVKY
KGKNIHEVLQ MTVEDARTFF DAVPAIARKL QTLMDVGLSY IRLGQSATTL SGGEAQRVKL
AKELSKRDTG KTLYILDEPT TGLHFADIQL LLDVLHRLKS HGNTIVVIEH NLDVIKTADW
IVDLGPEGGS GGGTILVAGT PEDVAEHPTS HTARFLKPLL QR
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