Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0490 |
Symbol | |
ID | 4602745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 600712 |
End bp | 602559 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639779826 |
Product | Zn-dependent protease with chaperone function |
Protein accession | YP_926370 |
Protein GI | 119773630 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTCA ATCAGGGAAC ACTCGACGAG CTGATGCTAA AGGCCCAACA GGACCTCAGC AGCGACCAGC AAAGCTACAA ACGTAAACTC AACCTCTATG TCTGGATGGC CTACGGCGTC ATCCTGTTAT TGCTGCTGCT TTTTGTCGGC CTGGTGGCAG GCACTGTGGG ACTGGCGTTC ACAAGCTCTG TATTCCTGGT GTTATTACTC AAGAAAAAGC TGATTATTCC GCTGCTGATT ATCGGCTGGA TGCTGGGAAG AGCACTCTTT CTCGGGGCCG GTAAACCCGA GGGATATAGG CTCAGACGCG CCGAGGCTCC CCTGCTGTTT GGGCTGGTCA ATGAGCTGAC CAAAAGCCTA AAGACGCCCA GAGTGCACAA CATCATTGTC ACGCCGGAAT TTAACGCCGC CATGGCGCAA ACGCCCCGCT GGTTTGTGGG CGGCCCCACC GAGAACACGC TTATAATAGG GCTTGAGCTG CTGATGTCAC TGTCCAAAGA AGAGCTCAAG GCGGTATTGG CCCACGAGCT TGGGCATCTG AGCGGCGACC ACGCCAAATT CAACGGCAAG ATTTACCGGG CCCGCGCCAT GTGGGAGCAA ATGATGCACA GCTTCGAAAG CTCCGGCTCC CTGGTTACCT ACCCCATGCG CAAGTTTTTC AGCTGGTATG CGCCGCGCTT TTCGGCCTAT TCATTCGCAC TGGCCAGACT CAACGAGTAC GAAGCCGATT TGTCTGCCGC CAAGCAGACC TCGGCAGCCA CTTTTCAGTC GGCATTGGTC AAAACCTCAC TGCTGGCCGA AATCACAGAT GAAGATTTCT GGCCACAATA TTACCGCCGT GCCTATGAGC AACCCGCCCC TGATACCCTG CCCTATACCG CCTTCAAGCA GTTTATAGAT GCAGGTGAAT TTGGCGACCT GCCGCTGCGA CTTGCAAAGG TGATGGCCGA ACGCACCTCG CCCCACAATA CCCACCCCTG CACCAAAGAC AGAGTAGAAG CGCTGGGCGC ATTCGATGAA GACGTACTGA AACTCAGGGA AAACAATGCC TGGCAGTTGC TCGGTAAGTC GGCCCATAAG ATCATTAAAG AATTCAATGA TAACTGGCTG ATGTATAACG GCCAGGAGTG GCAATTCCAG TACCAGCTGG CACAGGAACA ATTGGCCAGA CTCAAGGAAC TTGAGCCGAT GGACCCCAAT CAGTTATCGC TGGATCAAAA AGAGGAACTG GCGTTCCTTT TGGATAAGTT CCGGCGAGAC CCCGAACGGG TCGTGGCACT CTACGACGGC ATCATGGCAT CCAAACCCCA TGATCTCGAC ACGGCTTTGC GTTTGGCACA ACTCTACGCC AAAGCAGGCA ATCCACGTTG TCTGCCACTG TTCCGGACCT GCCTTGCCAA GGATGAACTG GTTAACGATG CCTGCATGGG CGCCTATGGC TACTACCTGC ATCAGGGCGA CGGCAATCAG GCCAACGAGT GGCTGGATAA ACTGGTTGCC CACGGTGAGA TAGCCGAGCG CGCCCGGCAG GAACGCATCA CCGTCGGCGC CAAAGACCCC TTGATGGCAC CAACCCTGCC CAAAGAGGCC ATAGATGCAC TCGCCGCGCG GCTGATTGCG ATAGACAGGG TGGAGGATGT GTGGCTTTGC CAAAAGTCGG TGCAGTACTT CCGTGACAGC CCTGTGGTAG TGCTTGCCAT CAAGGTGAGC GGCTGGACCG GCAAAGACAA GGTGCTGGAA CAATGCTTTG GGCAACTCCC GGCCGATTGG ACCAGTTTTA TCGTGACCAA GGATATGGAC TCGGCGCTGT TTAAAAAGGT GCAAACCAAA GGCACTCAGA TTATTTAA
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Protein sequence | MEFNQGTLDE LMLKAQQDLS SDQQSYKRKL NLYVWMAYGV ILLLLLLFVG LVAGTVGLAF TSSVFLVLLL KKKLIIPLLI IGWMLGRALF LGAGKPEGYR LRRAEAPLLF GLVNELTKSL KTPRVHNIIV TPEFNAAMAQ TPRWFVGGPT ENTLIIGLEL LMSLSKEELK AVLAHELGHL SGDHAKFNGK IYRARAMWEQ MMHSFESSGS LVTYPMRKFF SWYAPRFSAY SFALARLNEY EADLSAAKQT SAATFQSALV KTSLLAEITD EDFWPQYYRR AYEQPAPDTL PYTAFKQFID AGEFGDLPLR LAKVMAERTS PHNTHPCTKD RVEALGAFDE DVLKLRENNA WQLLGKSAHK IIKEFNDNWL MYNGQEWQFQ YQLAQEQLAR LKELEPMDPN QLSLDQKEEL AFLLDKFRRD PERVVALYDG IMASKPHDLD TALRLAQLYA KAGNPRCLPL FRTCLAKDEL VNDACMGAYG YYLHQGDGNQ ANEWLDKLVA HGEIAERARQ ERITVGAKDP LMAPTLPKEA IDALAARLIA IDRVEDVWLC QKSVQYFRDS PVVVLAIKVS GWTGKDKVLE QCFGQLPADW TSFIVTKDMD SALFKKVQTK GTQII
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