Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0326 |
Symbol | |
ID | 4602582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 393131 |
End bp | 394384 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639779655 |
Product | phosphopantothenoylcysteine decarboxylase., phosphopantothenate--cysteine ligase |
Protein accession | YP_926207 |
Protein GI | 119773467 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase |
TIGRFAM ID | [TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTATGGT TAGCGCCAGT TAATTTTAGT CGGGATCTGC GTGTGAGCCT GAATAATCGA AAAATCCTGC TGGGGATTGG TGGCGGCATT GCTGCCTACA AGAGCGCCGA TTTGGTGCGC CGTCTGAAAG AACAAGGGGC CGATGTGCGC GTGGTGATGA GCCAGAGCGC CTGCGAATTT ATCACCCCAC TGACACTGCA GGCCCTCAGC GGTTATCCGG TCAGCATGGA TTTGCTCGAC CCCGCTGCCG AAGCCGCCAT GGGGCACATT GAATTGGCCC GCTGGGCAGA ACTGATTATT CTGGCTCCGG CCACTGCCAA TCTGATTGCC CGCATGAGCA TAGGGATGGC GGATGAACTT ATTACCACCA CCTGCCTTGC CACCTCGGCG CCCATCGCCA TTTGCCCGGC AATGAATCAG CAGATGTATG CCAACCCTGC AACCCAGGCC AATTTAAGCA CACTGCAGCA ACGTGGCATG CTGATTTGGG GCCCGGGCAG CGGTAGTCAG GCCTGCGGCG AAGTCGGTGC AGGCCGTATG TTGGAGCCGC TGGAAATCCG CACTCTGGCA GAACAATTTT TTGCTCAAAA GGCTCAGGCA AGCAGCGCGC TGCAGGGCGT CAAACTCATG CTGACCGCTG GCCCCACCCG CGAAGCCATA GATCCTGTGC GTTATATTTC CAACCACAGC TCCGGCAAAA TGGGCTTTGC CCTTGCCGAG GCCGCTGTGG CCATGGGCGC AGAAGTGACT CTGGTATCAG GTCCTGTGAC CCTGGCCACG CCAAGAGGCG TGAGCCGCAT CAATGTGGAC TCGGCCGAAC AAATGTTGAC CGCTGTAATG CAACATATTG ACCAGCAAGA TATCTTCATT GGCTGTGCTG CCGTGGCTGA TTATCGGGTT GCCGATGTCG CTGCCGGTAA AATTAAAAAG AGCAGCGAAA CCATGCAGCT TGCGCTGGTG CGCAATCCTG ATATCTTAGC CACGGTTGCC GCCCTAGAGG CGCGACCTTT TACGGTGGGA TTTGCCGCCG AAACCCACGA CGTAGAAACC TACGCCCGAG ATAAACTCAA ACGCAAAAAT CTCGATATGA TCGCGGCCAA TGATGTGTCT GTGCCGGGTC AGGGGTTTAA TTCGGATACC AATGCTCTGC GCGTCTTTTG GCCTCAGGGC AACCAGGATT TGCCGGCAAC CGACAAGTTG TCACTGGCAT ACCAACTGCT TTCGCTGATA TCGACAAAAA TAACCAAAAA ATGA
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Protein sequence | MVWLAPVNFS RDLRVSLNNR KILLGIGGGI AAYKSADLVR RLKEQGADVR VVMSQSACEF ITPLTLQALS GYPVSMDLLD PAAEAAMGHI ELARWAELII LAPATANLIA RMSIGMADEL ITTTCLATSA PIAICPAMNQ QMYANPATQA NLSTLQQRGM LIWGPGSGSQ ACGEVGAGRM LEPLEIRTLA EQFFAQKAQA SSALQGVKLM LTAGPTREAI DPVRYISNHS SGKMGFALAE AAVAMGAEVT LVSGPVTLAT PRGVSRINVD SAEQMLTAVM QHIDQQDIFI GCAAVADYRV ADVAAGKIKK SSETMQLALV RNPDILATVA ALEARPFTVG FAAETHDVET YARDKLKRKN LDMIAANDVS VPGQGFNSDT NALRVFWPQG NQDLPATDKL SLAYQLLSLI STKITKK
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