Gene Sama_0325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0325 
Symboldut 
ID4602581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp392676 
End bp393134 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content58% 
IMG OID639779654 
Productdeoxyuridine 5'-triphosphate nucleotidohydrolase 
Protein accessionYP_926206 
Protein GI119773466 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0756] dUTPase 
TIGRFAM ID[TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACAC CGATCGAACT GAAAATTCTC GACTCCCGCA TAGGCTCGGA ATTCCCACTG 
CCGGCCTATG CCACGCCTGG CAGTGCCGGC ATGGACCTTA GAGCCATGTT GGATACCAAC
CTGACCATAG CCCCTGGCGA AACCGTGCTC ATACCTACCG GCATCGCCGT GCATGTGGCC
GACCCCAGCC TGGCAGCCGT GATCCTGCCC CGCTCCGGTA TGGGCCATAA ACATGGCATA
GTACTGGGCA ACCTGGTGGG ACTGATTGAC TCTGACTATC AGGGTCCGCT GATGGTGTCC
TGCTGGAACC GCGGCAACGA GCCCTACACC CTGCAAATCG GTGACCGCCT GGCACAACTG
GTGTTTGTTC CCGTAGTGCA GGCTGAATTT AAACTGGTGG ACGAGTTCGA CACCTCAATG
CGCGGCGAAG GTGGTTTTGG CCATTCAGGC ACCCGCTAA
 
Protein sequence
MKTPIELKIL DSRIGSEFPL PAYATPGSAG MDLRAMLDTN LTIAPGETVL IPTGIAVHVA 
DPSLAAVILP RSGMGHKHGI VLGNLVGLID SDYQGPLMVS CWNRGNEPYT LQIGDRLAQL
VFVPVVQAEF KLVDEFDTSM RGEGGFGHSG TR