| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0262 |
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| Symbol | |
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| ID | 4602518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 301630 |
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| End bp | 302355 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639779591 |
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| Product | tRNA guanosine-2'-O-methyltransferase |
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| Protein accession | YP_926143 |
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| Protein GI | 119773403 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.132081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCGG AACGCTTTGC CCGCATCAAT GAGATGCTGG ACAACCGTCA ACCGGATCTG
ACCGTCTTAC TCGACCAGGT CCACAAGACC AACAACATTG CAGCAGTGCT GCGCAGTGCC
GATGCCGTGG GTGTCCACCA GCTGCATGCG GTGTGGCCAG AAAGCGCCAT GCGGGTATCC
GGCAATACCG CCTCGGGCAG CCAGCAATGG GTTAAAACCC TGCGCCATCA AACGGTGACC
GATGCCATCA CCGCCCTCAA AGCAGATGGT ATGCAGGTGG TGGTGACCAA TTTCTCCCCC
AATGCCAAAG ACTTTCGCGA GATTGATTAC ACTAAACCCA CCGCCATCGT ACTCGGGCAC
GAGAAAAACG GTGTCAGTGA TGAAGCCGTG CGCCTTGCCG ATGCCGAAGT GATTATTCCC
ATGGTGGGCA TGGTGCAATC GTTGAATGTG TCAGTGGCCG GTGCCCTGGT ACTGTTTGAG
GCCGAGCGCC AGCGCCGGGC TACAGGCATG TATGGCAACC GAAAACTTCC CGAAGACTAT
TGTCAGAAGC TGCTGTTCGA GCAAGGCCAT CCCATCTATG CCAAGGCCTG TCGTCGCAAG
GGACTGGTCT ACCCCGCTAT TGATGAAACC GGCCAAATCA TCGCGCCGCC CGATTGGTGG
CAAAAGATGC GCGAAGCCGA CCCCGACTCC CCGCGTCCCG AACGCGGCCG CCAGCGCCGC
ATGTAA
|
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| Protein sequence | MSPERFARIN EMLDNRQPDL TVLLDQVHKT NNIAAVLRSA DAVGVHQLHA VWPESAMRVS
GNTASGSQQW VKTLRHQTVT DAITALKADG MQVVVTNFSP NAKDFREIDY TKPTAIVLGH
EKNGVSDEAV RLADAEVIIP MVGMVQSLNV SVAGALVLFE AERQRRATGM YGNRKLPEDY
CQKLLFEQGH PIYAKACRRK GLVYPAIDET GQIIAPPDWW QKMREADPDS PRPERGRQRR
M
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