| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0260 |
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| Symbol | |
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| ID | 4602516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 298127 |
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| End bp | 299497 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639779589 |
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| Product | argininosuccinate lyase |
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| Protein accession | YP_926141 |
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| Protein GI | 119773401 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0165] Argininosuccinate lyase |
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| TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.285563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTGT GGGGCGGCAG ATTTCAGGGG CAAGCCAGTG CCCTGTTCCA ACTCTTTAAC
GATTCACTGC CGGTAGATTA CCGACTGTTC GTCCAGGACG TGGAAGGCTC CATCGCCTGG
GCCGATGCCA TCGCCAGCGT GGGCATTTTG AATGCCGATG AATGCAGCCG CCTCAAGGCA
GCCCTGACGG AGCTGCTTGA GGAAGTGGGC GAGGATGAGT CGGCCATCAT CGGCAGCGGC
GCCGAAGACA TTCACAGCTT TGTGGAAACC AAACTGATTG AAAAAGTGGG CGATCTCGGT
AAAAAGCTGC ACACCGGCCG TTCCCGTAAC GACCAGGTGG CCACCGACCT CAAGCTATGG
TGCAAGGCAT CGGGCGGCCT GCTGGAAACC AAGCTTACTG CCGTGATTCA GGCACTGCTG
GCACTGGCAA GCCGTGAGCT GGATGCCGTG ATGCCCGGCT ACACCCACCT GCAGCGGGCA
CAGCCTGTGA CCTTTGGTCA CTGGTGCCTG GCCTATGTGG AAATGCTGGA GCGTGACCTG
TCCCGTCTTG CCGATGCTTT GAAGCGCCTT AACACCTGTC CACTGGGCTC GGGTGCGCTG
GCGGGCACTG CCTATGCTAT CGACCGCCAT GAGTTGGCCG CCGCGCTGGG TTTTGGCGGA
CCGACCCTCA ACAGTCTGGA TTCCGTCTCC GACCGTGACC ATGTGGTGGA GCTCTGCGCC
GCTGCCTCTG TGTCTATGAT GCATCTGTCG CGGATGGCGG AAGACCTGAT TTTCTTCAAC
ACGGGTGAAG CGGCTTTTGT GGAGCTGGCC GATAACGTGA CTTCGGGTTC TTCGCTGATG
CCCCAGAAGA AAAACCCCGA TGCGCTGGAA CTGATCCGCG GTAAAACTGG CCGTGTTTAC
GGCAATCTCG TGGGCATTCT CACCACCATG AAGGCACTGC CGCTGGCCTA CAACAAGGAC
ATGCAGGAAG ACAAAGAAGG TCTGTTCGAC ACCCTCGACA GCTGGGGCAT TTGCCTGGAT
ATGGCAGCAC TGGTGCTGGA GGGGGTGAAG GTAAACCGTG ACAACACCAA GCAGGCGGCC
CAGGCGGGTT ATGCCAACGC CACCGAGCTT GCCGACTATC TGGTTGCCAA GGGCATGCCG
TTCCGGGAAG CACACCATGT GGTGGGTGAA GTGGTGCTGC ATGCCATCAG CAAGGGACAG
GCGCTGGAAG CCTTGCCGCT GGCCTCGCTG CAATCCTTTG CCGCCGTGAT TGGCGACGAT
GTCTACCCGC ACCTCAGCCT GGATGAATGT CTGGCGAAGC GGGATGTGCT GGGCGGCACT
GCCATCAAGC AGGTGACAGC TGCACTGGCG GCCAAACAGC AGCAATACTG A
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| Protein sequence | MALWGGRFQG QASALFQLFN DSLPVDYRLF VQDVEGSIAW ADAIASVGIL NADECSRLKA
ALTELLEEVG EDESAIIGSG AEDIHSFVET KLIEKVGDLG KKLHTGRSRN DQVATDLKLW
CKASGGLLET KLTAVIQALL ALASRELDAV MPGYTHLQRA QPVTFGHWCL AYVEMLERDL
SRLADALKRL NTCPLGSGAL AGTAYAIDRH ELAAALGFGG PTLNSLDSVS DRDHVVELCA
AASVSMMHLS RMAEDLIFFN TGEAAFVELA DNVTSGSSLM PQKKNPDALE LIRGKTGRVY
GNLVGILTTM KALPLAYNKD MQEDKEGLFD TLDSWGICLD MAALVLEGVK VNRDNTKQAA
QAGYANATEL ADYLVAKGMP FREAHHVVGE VVLHAISKGQ ALEALPLASL QSFAAVIGDD
VYPHLSLDEC LAKRDVLGGT AIKQVTAALA AKQQQY
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