| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0254 |
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| Symbol | |
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| ID | 4602510 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 289851 |
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| End bp | 292514 |
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| Gene Length | 2664 bp |
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| Protein Length | 887 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639779583 |
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| Product | phosphoenolpyruvate carboxylase |
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| Protein accession | YP_926135 |
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| Protein GI | 119773395 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2352] Phosphoenolpyruvate carboxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.974753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACG TAAAGGGTAC TGAGAAAGTA ACAGACATGT ACGCCCAGCT CAGGGCGAAC
GTGGGTATGA TGGGACAAAT CCTGGGCGAC ACCATGAAAG AGCATTTGGG TGAAGCCTTT
CTGGATAAGG TTGAGCAAAT CCGCCTGCTC GCCAAGGGCA GCCGCAGCGG TGATGACGAG
GCAAGGGCAA AAATGCTGGC CCTGCTCGGA CAACTGCCAG ATGAAGAGCT GGTCCCATTC
GCCAAAGCCT TTAACCAGTT TCTGAACCTG GCCAACATTG CCGAGCAGTT CCACACCATC
AGCCGTAATT GTGATGAGCT GGTGTGTGTG CCGGATCCGG TGGAACAGCT CCTTGGCAGA
ATGCTTGGCA GCCAGGTCGA TAAAAAGGAA ATGCTGGCCA CCCTCAAGAC GCTGGACATA
GATTTAGTAT TAACGGCGCA CCCTACCGAG ATCAGCCGCC GCACGCTCAT TCAAAAATAC
TCGGCCATCG TCGATTGTTT GCATGATTTG GAAAACCCGC AGCTCACCGA GCGCGAGCAT
AAGAGCCAAA CCCTCAGGTT GCGCCAACTG ATTGCACAAA TCTGGCACAC CAATGAAATT
CGCCGTGAGC GCCCTACTCC GGTCGACGAA GCCCGCTGGG GCCTGTCTAC CATAGAGACG
TCCCTGTGGC ATGCGGTGCC TGACTTTCTG CGGCAGTTAA ACGATCAGGT AGAAGAAGCC
ACCGGCACCC AAATTCCTAC CGACATGGCG CCGGTGCGCT TCTCAAGTTG GATGGGGGGG
GACCGTGATG GCAACCCCTT TGTGACCGCC AGGGTCACCG CCGAAGTATT GGATCGCAAT
CGACACACCG CCGCGCGCCT GTATCTGAAA GATGTGGTTG AGCTGGTCGG CGAATTGTCG
ATGGAAGAAG CCAACGCCGA ACTCATGGCC TACAGCAATA ACTCTTGCGA GCCATACCGG
GACGTACTGC GAAGCTTGCG CAGTAAACTG CGCAACACCA TCGACTTCCT CAACGCCCGC
CTCGAAGGCC ACAACCCCGA AGTGGCCCGT GATGAGATAA TCTGGGAACA GCAGGATCTC
GAGACGCCAC TCAAGTTACT GTACAAAAGT CTGTGTGACT CGGGCATGCG CCTGATTGCC
AACGGCCGTC TGCTGGATAT GCTGCGCCGT CTGGCCTGTT TCGGCATCCA TATGCTGAGG
CTGGATATTC GTCAGGACGC CGGCCGCCAC GAAGCCGCCA TTGCCGAGCT GACGCGCTAC
CTTGGTCTTG GCGATTACGC CCATTGGAGC GAAGCGGAAA AGCAAGCCTT CCTGCTGAAA
GAACTCAGTG GTCGCAGACC GCTTATCCCC GGCAACTGGA AACCATCTGA CGAAGTTGCC
GAAGTACTGG CGACCTGCCG CCTGGTGGGC ACTCAGCCCC AGCAGGCGCT AGGCTCCTAT
GTAATCTCTA TGGCGAGCCT GCCATCGGAT GTGCTGGCAG TATTGCTGCT GCTCAAAGAG
TCCGGCTGCA ACTACCCCAT CCGGGTGGTC CCCCTGTTCG AGACTCTCGA TGACCTGAAT
AATGCCGCTG CTTGCATTAC CGCGCTGTTG GACATCGACT GGTACCGGGG TTACACCAAG
GGCATGCAGG AAGTGATGAT TGGGTACTCC GACTCCGCCA AAGATGCCGG GGTTATGGCG
GCCGCCTGGG CGCAATATCG CGCTCAGGAG CAATTGGTGA AGGTATGCAA CAAGGCTGGC
GTTAAGCTAA CCCTGTTCCA CGGCCGTGGT GGCACCATAG GTCGCGGCGG TGGCCCCGCC
CATAAGGCGA TTCTGTCGCA GCCGCCCGGC AGCGTCGATG GCCGTATTCG GGTAACCGAA
CAGGGTGAGA TGATCCGCTT TAAGTTCGGT CTGCCCAAGC TCGCGGTACA ATCGCTGGCA
CTCTATACCT CTGCCGTGCT GGAGGCGACC TTGCTGCCCC CACCGGAGCC CAAACAGGAA
TGGCGCAATG CCATGCAACG CATTGCGGAC GAGTCAGTAG AGGCGTATCG CGGCATAGTG
CGACAAGAAC CCGACTTCGT ACCTTACTTC CGCGCTGCGA CTCCCGAGGT AGAACTGGGT
AAGCTGCCAC TGGGAAGTCG TCCTGCCAAG CGTCGCGTCG ATGGAGGCAT CGAGAGTCTG
CGTGCCATCC CCTGGATTTT CGCCTGGTCT CAGAACCGCT TAATGCTGCC CGCCTGGCTT
GGTGCAGGCG AGGCACTGAA AGCCGCCGCC GATCGTGGTG AACTTGGCCT GCTGCGGGAA
ATGGAACAGG ACTGGCCCTT CTTCAACACC CGCATCTCCA TGCTGGAGAT GGTGTACAGC
AAAGCAGAAC CGAATCTGGC CCGCTACTAC GAGCAGTGCC TGGTGCCCGA AGCCCTGCAT
CATCTGGGGG TAACCCTGCG TGAACGCCTG GCGCTTGGTG TAGAGGCGGT GCTGGCTCTC
ACGGGAGAAG ACAGCCTGAT GGCCCATACG CCATGGAATC GCGAATCTGT GAGACTGAGA
AACCCCTATA TCGACCCGCT TAACTTCCTG CAGGCGGAAC TGCTTGGCCG TACCCGTCGT
GAAGAAACGC CGTCGGAGTC TGTACAACTG GCACTGATGC TCACCATCGC CGGTGTTGCC
GCTGGCATGA GGAACACAGG GTGA
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| Protein sequence | MTDVKGTEKV TDMYAQLRAN VGMMGQILGD TMKEHLGEAF LDKVEQIRLL AKGSRSGDDE
ARAKMLALLG QLPDEELVPF AKAFNQFLNL ANIAEQFHTI SRNCDELVCV PDPVEQLLGR
MLGSQVDKKE MLATLKTLDI DLVLTAHPTE ISRRTLIQKY SAIVDCLHDL ENPQLTEREH
KSQTLRLRQL IAQIWHTNEI RRERPTPVDE ARWGLSTIET SLWHAVPDFL RQLNDQVEEA
TGTQIPTDMA PVRFSSWMGG DRDGNPFVTA RVTAEVLDRN RHTAARLYLK DVVELVGELS
MEEANAELMA YSNNSCEPYR DVLRSLRSKL RNTIDFLNAR LEGHNPEVAR DEIIWEQQDL
ETPLKLLYKS LCDSGMRLIA NGRLLDMLRR LACFGIHMLR LDIRQDAGRH EAAIAELTRY
LGLGDYAHWS EAEKQAFLLK ELSGRRPLIP GNWKPSDEVA EVLATCRLVG TQPQQALGSY
VISMASLPSD VLAVLLLLKE SGCNYPIRVV PLFETLDDLN NAAACITALL DIDWYRGYTK
GMQEVMIGYS DSAKDAGVMA AAWAQYRAQE QLVKVCNKAG VKLTLFHGRG GTIGRGGGPA
HKAILSQPPG SVDGRIRVTE QGEMIRFKFG LPKLAVQSLA LYTSAVLEAT LLPPPEPKQE
WRNAMQRIAD ESVEAYRGIV RQEPDFVPYF RAATPEVELG KLPLGSRPAK RRVDGGIESL
RAIPWIFAWS QNRLMLPAWL GAGEALKAAA DRGELGLLRE MEQDWPFFNT RISMLEMVYS
KAEPNLARYY EQCLVPEALH HLGVTLRERL ALGVEAVLAL TGEDSLMAHT PWNRESVRLR
NPYIDPLNFL QAELLGRTRR EETPSESVQL ALMLTIAGVA AGMRNTG
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