| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0229 |
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| Symbol | rplR |
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| ID | 4602485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 259547 |
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| End bp | 259897 |
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| Gene Length | 351 bp |
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| Protein Length | 116 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639779550 |
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| Product | 50S ribosomal protein L18 |
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| Protein accession | YP_926110 |
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| Protein GI | 119773370 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0256] Ribosomal protein L18 |
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| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000135008 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000829235 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGGATAAGA AATCATCTCG CTTGCGCCGC GCTACCCGCG CTCGCAAGAA GATCCAAGAG
CTGGGCGTGC ACCGTTTGGT GGTACATCGT ACCCCCCGTC ACATCTACGC TCAGGTGATC
AATCCTGAAG CTCAGGTTGT TGCAGCGGCT TCTACTGTTG AGAAATCAAT CAAGGAAGCT
CTGAAGTCTA CCGGTAACGT GGATGCCGCC AAGGCAGTGG GTAAAGCCAT CGCTGAGCGC
GCCGTCGAGA AGGGCGTAAC TGTAGTTGCG TTCGATCGTT CTGGCTTCAA GTATCACGGT
CGTGTTGCTG CCTTGGCAGA CGCCGCTCGT GAAGCTGGCC TCCAGTTCTA A
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| Protein sequence | MDKKSSRLRR ATRARKKIQE LGVHRLVVHR TPRHIYAQVI NPEAQVVAAA STVEKSIKEA
LKSTGNVDAA KAVGKAIAER AVEKGVTVVA FDRSGFKYHG RVAALADAAR EAGLQF
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