| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0225 |
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| Symbol | rplE |
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| ID | 4602481 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 257717 |
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| End bp | 258256 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639779546 |
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| Product | 50S ribosomal protein L5 |
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| Protein accession | YP_926106 |
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| Protein GI | 119773366 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0094] Ribosomal protein L5 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000033393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000847343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGGCGAAAC TGCATGATAA ATACAAAGAG ACTGTGATCG CTGAACTGTC TAAAAAGTTC
GGTTATACCA GTGTCATGCA AGTCCCTCGG ATTGAGAAAA TCACCCTGAA CATGGGTGTT
GGCGAAGCTG TTGCTGACAA GAAAATCATG GAAAACGCTG TCCGTGATAT GACTGCAATC
GCTGGCCAGA AGCCAGTTGT GACTGTAGCT CGTAAGTCAG TCGCTGGTTT CAAAATCCGT
GAAGGCTACC CTATTGGCTG CAAAGTAACC CTGCGCGGTG AGCGTATGTG GGAATTCTTT
GAGCGTCTGC TGGATATCGC AATCCCTCGT ATCCGTGACT TCCGTGGTCT GAGCGCTAAG
TCGTTCGACG GCCGTGGTAA CTACGCGATG GGCGTGCGTG AGCAAATCAT CTTCCCTGAG
ATCGACTATG ACAAGATCGA TCGCGTTCGT GGTATGGACA TTGTGATCAC CACAACCGCC
AAGAACGATG AGGAAGGTCG TGCTCTTCTG GACGCTTTTA ACTTCCCATT CAAGAAATAA
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| Protein sequence | MAKLHDKYKE TVIAELSKKF GYTSVMQVPR IEKITLNMGV GEAVADKKIM ENAVRDMTAI
AGQKPVVTVA RKSVAGFKIR EGYPIGCKVT LRGERMWEFF ERLLDIAIPR IRDFRGLSAK
SFDGRGNYAM GVREQIIFPE IDYDKIDRVR GMDIVITTTA KNDEEGRALL DAFNFPFKK
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