Gene Sama_0222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0222 
Symbol 
ID4602478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp256589 
End bp256837 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content50% 
IMG OID639779543 
Product30S ribosomal subunit protein S17 
Protein accessionYP_926103 
Protein GI119773363 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0186] Ribosomal protein S17 
TIGRFAM ID[TIGR03635] 30S ribosomal protein S17 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000618059 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000693674 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTCTGACA AAATCCGTAC TTTGCAGGGT CGTGTGACCA GCAACAAGAT GGACAAGTCC 
ATTACTGTGG CTGTTGAGCG TCTGGTGAAA CACCCAATCT ATGGTAAGTT CATCAAGCGT
ACAACCAAGA TCCACGCCCA CGACGAGCTG AACCAGTGCA ACGAAGGCGA TATCGTGACC
ATTCGCGAAT GTCGTCCTCT GTCCAAGACC AAGTCCTGGA CCCTGGTAGA CGTAGTTTCT
AAGGCTTAA
 
Protein sequence
MSDKIRTLQG RVTSNKMDKS ITVAVERLVK HPIYGKFIKR TTKIHAHDEL NQCNEGDIVT 
IRECRPLSKT KSWTLVDVVS KA