| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0202 |
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| Symbol | rplK |
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| ID | 4602458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 236098 |
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| End bp | 236526 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639779523 |
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| Product | 50S ribosomal protein L11 |
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| Protein accession | YP_926083 |
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| Protein GI | 119773343 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0080] Ribosomal protein L11 |
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| TIGRFAM ID | [TIGR01632] 50S ribosomal protein L11 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000393914 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000945283 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCAAAGA AAATTGAAGC TTATATTAAG CTGCAAGTAA AATCCGGATC TGCAAACCCT
TCACCACCAG TTGGTCCAGC TCTGGGTCAA AAAGGTGTGA ACATCATGGA ATTCTGTAAA
GCGTTCAACG CCCGTACAGA AAAAATGGAA AAGGGCATGC CTATCCCTGT AGTGATCACT
GTGTACAGCG ATCGCTCATT CACTTTCGAA ACCAAGACGC CTCCAGCTTC GTTCCTGCTC
AAGCAGGCTG CTGGCCTGAA ATCAGGTTCT AGCCGTCCTA ACACCCAGAA AGTGGGTACT
ATCAAGCGTG CAAAAGTTCA GGAAATCGCT GAGCTGAAAG CAGCTGACAT GACTGGTGCT
GACGTTGAAG CGATGACTCG CTCAATCGAA GGTACTGCAC GTTCAATGGG CTTGGTAGTA
GAGGACTAA
|
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| Protein sequence | MAKKIEAYIK LQVKSGSANP SPPVGPALGQ KGVNIMEFCK AFNARTEKME KGMPIPVVIT
VYSDRSFTFE TKTPPASFLL KQAAGLKSGS SRPNTQKVGT IKRAKVQEIA ELKAADMTGA
DVEAMTRSIE GTARSMGLVV ED
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