| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0156 |
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| Symbol | |
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| ID | 4602413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 182293 |
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| End bp | 185619 |
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| Gene Length | 3327 bp |
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| Protein Length | 1108 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639779468 |
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| Product | glycosyl hydrolase family 31 protein |
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| Protein accession | YP_926038 |
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| Protein GI | 119773298 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1501] Alpha-glucosidases, family 31 of glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0105603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGCC TCTCTCCCTC ATTTTCTCCA TGGCGCTCCC GTGCCAGACT AAGCCCCCTG
GCGCTGGCCG TGGCCTTGGT CATTGCTCCC ATCGGATTTA CTGCCAACGC CGCCCCAGTG
GGTAAGTTGG ATACCCTCAG GCAGGAGGGT GCCAGCGTTG ATATTCGCAC CGATAGTGGC
GCTTTGGTGC AAGTGAGCGT GCTTAAGCCT TCGCTTATCC GCATTCAGGC GGGAGCCAAT
GGCAAACTCA CCGCTGAAGG CAGCAAGGCC GCAGCCATAG TTATCAAAGA TGATTACCCG
GCCGTGGCCT ATACCCTCAG TGATGAAGGT GACTATCGGC TGCTGAAAAC CGAGGCGCTG
GCACTGCGCA TTTATGAAGC GCCACTGCGC TTTGCCCTCT ATCAGGCCGA CAACCAAACG
CTTATCACCG AAGAGTTGCA AAGCCTGGAG TTGGGTGAAT CCAGCACGGT ACAGACTCTC
AGTACAGATG TCGACGAGCG CTTCTTCGGT GGCGGCCAGC AAAACGGCGC CTTCGAGTTC
AAGGGCAAGA GCTTGGAAAT CTCTTACTCT GGTGGCTGGG AAGAGGGCGA CAGACCAAGC
CCGGCGCCTT TCTATCTGTC GAGCAAGGGC TATGGTGTGC TGCGCAACAC CTGGGCCAAC
GGCAGTTATG ACTTCAGAAG CAGCGACGCT CTGCGTCTCG GCCACGATGA AGCCCGCTTC
GATGCTTTCT TCTTTGCCCC CGGCAGTATT CAACAGGTGC TGGCTGACTA CACAGAACTC
ACCGGCCGCG CCAGACTTAT ACCGCGCTGG GCCTTTGAAT ATGGCGATGC CGATTGCTAC
AACGACGGCG ACAACGTCAA AAAGCCCGGC ACAGTGCCCG ATGGCTGGAG TGATGGTCCA
ACGGGTACCA CGCCAGATGT GATTGATTCA GTAGCTAAAA AGTATCGCGA ACACGATATG
CCCGGCGGCT GGATTTTGCC CAACGACGGC TATGGCTGCG GCTATACCGA CTTGCCGAAA
GTGGTTGAAG GGCTCGCCAA ATACGGTTTC AGAACCGGGC TTTGGACCGA AGATGGGGTA
GATAAAATCG CCTGGGAAGT GGGCAAGGCG GGCACCCGCG CCCAAAAGCT CGATGTGGCC
TGGACCGGTG AGGGCTATCA ACATGCGCTG GATGCCAACA AGGCTGCTGC CGATGGCATT
CTGGATAACT CAGACTCGCG TCCCTTCCTG TGGACCGTGA TGGGCTGGGC AGGCATGCAG
CGCTATGCGG TGACCTGGAC CGGCGATCAG TCCGGCAGCT GGGATTACAT CCGTTGGCAT
ATCCCCACTT TGATTGGCTC TGGTCTGTCC GGCCAGGCCT ATGCTACCGG CGATGTGGAC
GCAATTTTTG GTGGCAGCCC GGAAACCTTC ACCCGCGACT TGCAGTGGAA GGCGTTTACA
CCGGTGCTGA TGGGGATGTC CGGCTGGTCC AAGGCGGCGC GCAAACACCC CTGGTGGTTC
GACGAGCCCT ATCGCAGCAT CAACCGCGAC TATCTGAAGC TGAAAATGCG CCTCACCCCT
TACATGTACA CCACCGCCTT TGAAACGGAG CAAACCGGCG CCCCCATAGT TCGCGGGCTG
ATGTGGGATT ACAACGATGA TCCCAATGCC AACACAGAAG CGCACAAGTA TCAGTTTTTG
CTTGGCAAAG ACATGCTGGT AGCACCCGTG TACCGCTCTC AGACGGCCAG CAAGGGTTGG
CGTGAAGATG TGTACCTGCC CAAGGGCCAG TGGATTGATT ACTGGGATGG CAGGGTGGTT
GATGCCCCCG AAGGCGGTGC CAGCATCGAC TATCAGGTGG ACTTGAATAC CATTCCGGTG
TTTGTGCGCG CCGGTGCCAT TATCCCCATG TACCCGGAAG CCCTGTATGA CGGCCACAAG
CCCAAGGATG TGCTGACCCT GGATATCTAC CCCTACGGTG AGTCTGAATA CCTGATGTAC
GAGGACGATG GCAACACCCG CCGCTATCAG CAGGGCGAGT TTGCCCGTCA GCTCTTTGCG
GTGAAGGCGC ACGAGGGCAA GGCTGGCGAC ATTGAAGTCA GCATTGGCGC TGCCGAGGGT
AAGTTCGATG GCCAGGACGA AGAACGTGTC TACGAGCTGT GGCTGCATAC CCGCACCAAG
CCAGATTCTG TGCTGCTAAA TGGTAAAAAA CTGAAAGCCC TCAAGGATGA GGCAGCATTG
GCCAAGGCCA AAAGTGGCTG GACCTATTCG GATACCAAGT ACGGTACAGT GCTGGTGAAA
GTCGCCAAGA CTTCAGTGCG GGAGGCGCTG GAGATCAAGC TGGAAATTGA TGACGCCAAG
GTGCTGGCGG CTACCGCCGG TTATAGCGTG GCGCCCGAGC TTGGCAATGA AATTCCCGCC
GACAGCCTGT TGGTACTGGG TCGTCCTGCC GAAGAATCCG GGCATCCGCT GGAAAATGCC
TTCGATGGCA ATCCGGATAC CTGGTTCCGG ACCAAGCGCG ATCAGGCACA AAAAACGGGT
GCCCACGAGT TTACCCTGGC ACTGGGCGAG CGACGTTTTA TTGCGGGTTT TGAGATTGCC
CCCCGTAACG ATAAGCACTG GGAGTATGGT CAGGTAGCCG ACTATGAGGT GTATCTGGGC
GAAAACAACG GTGAGTGGGG CGAGCCGGTG GCCAAGGGCA GGTTGGAGAA ATCACAAACC
ATGCAGAAGG TTGAGTTTGC ACCCAAGCCC GGCAGCTTGC TGCGTTTCAG GATACTCAGT
ACCCAGAATG AGCTTGGCAG CGACCCCATG GTGACCGCTG CCAAGGGGCA GGGTGGTGCC
TTCAATGCGC TGCTGCCAAA GAGTGTCACG CCTATTACCA TCAGCGAGTT CAAGGTGCTG
ACTGCGCCTG AGCCCAAAGC GCCTAAAACC CAGCTGTTTC TCGCTGAGAT GACGCCGCAA
AAGCTGGATA AATCCGCAGG CAGTCGTGTG GCCCTGAACA GTGCCATCGG CGGTAAACCC
ATGAGCATGA ACGGCCTTAA GTTCAGCAAG GGGCTGGGGA TGGCGGCAAA CGGTCGGGTC
GACTATCGCC TTGAAGGTAA CTGGCAGCTG CTGCGGGCCG ATCTCGGTAT CGATGACAGC
TGTAAAACCA AGGGCGGTTT GCACTTTAAG ATCTTCGGTG ACGGCAAGTT GATGTACGAC
TCTGGCCTGA TTGAAGCGCC AGCTGTGGTG AAGCCCGAGC TGGACATACG CGGCGTTGAA
ATCTTGAGCC TGCAAACCGA AGGCACTGCC AAGGGCGTTT GTGGCAACTG GGCCAATGCC
TCTGTGGTGG GCTGGCCCAA GGGCTGA
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| Protein sequence | MASLSPSFSP WRSRARLSPL ALAVALVIAP IGFTANAAPV GKLDTLRQEG ASVDIRTDSG
ALVQVSVLKP SLIRIQAGAN GKLTAEGSKA AAIVIKDDYP AVAYTLSDEG DYRLLKTEAL
ALRIYEAPLR FALYQADNQT LITEELQSLE LGESSTVQTL STDVDERFFG GGQQNGAFEF
KGKSLEISYS GGWEEGDRPS PAPFYLSSKG YGVLRNTWAN GSYDFRSSDA LRLGHDEARF
DAFFFAPGSI QQVLADYTEL TGRARLIPRW AFEYGDADCY NDGDNVKKPG TVPDGWSDGP
TGTTPDVIDS VAKKYREHDM PGGWILPNDG YGCGYTDLPK VVEGLAKYGF RTGLWTEDGV
DKIAWEVGKA GTRAQKLDVA WTGEGYQHAL DANKAAADGI LDNSDSRPFL WTVMGWAGMQ
RYAVTWTGDQ SGSWDYIRWH IPTLIGSGLS GQAYATGDVD AIFGGSPETF TRDLQWKAFT
PVLMGMSGWS KAARKHPWWF DEPYRSINRD YLKLKMRLTP YMYTTAFETE QTGAPIVRGL
MWDYNDDPNA NTEAHKYQFL LGKDMLVAPV YRSQTASKGW REDVYLPKGQ WIDYWDGRVV
DAPEGGASID YQVDLNTIPV FVRAGAIIPM YPEALYDGHK PKDVLTLDIY PYGESEYLMY
EDDGNTRRYQ QGEFARQLFA VKAHEGKAGD IEVSIGAAEG KFDGQDEERV YELWLHTRTK
PDSVLLNGKK LKALKDEAAL AKAKSGWTYS DTKYGTVLVK VAKTSVREAL EIKLEIDDAK
VLAATAGYSV APELGNEIPA DSLLVLGRPA EESGHPLENA FDGNPDTWFR TKRDQAQKTG
AHEFTLALGE RRFIAGFEIA PRNDKHWEYG QVADYEVYLG ENNGEWGEPV AKGRLEKSQT
MQKVEFAPKP GSLLRFRILS TQNELGSDPM VTAAKGQGGA FNALLPKSVT PITISEFKVL
TAPEPKAPKT QLFLAEMTPQ KLDKSAGSRV ALNSAIGGKP MSMNGLKFSK GLGMAANGRV
DYRLEGNWQL LRADLGIDDS CKTKGGLHFK IFGDGKLMYD SGLIEAPAVV KPELDIRGVE
ILSLQTEGTA KGVCGNWANA SVVGWPKG
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