Gene Sama_0153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0153 
Symbol 
ID4602410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp179654 
End bp180034 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content56% 
IMG OID639779465 
Producthypothetical protein 
Protein accessionYP_926035 
Protein GI119773295 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.489061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCACC GCAAAGTAGT CTCAGCTCTG TTACTTTGTG CAATAGCCAC AGTCGCACCA 
CCTGCATGGG CAATAGCACT GTTTGAGCTC ACTCCAAGCC AATGTGCTGT TGACGAGGGC
GATTGTAGCG TCAGGGTTAC TCTGGCCTGG CAGGCCGAAG TGCAGCAAAG CGTCTGCATT
GAGGTGCTTG GCGAGAGTGA GGCGCTTTAC TGCGATCTTC CCGCCAGCCA CACTGCCTGG
TCACTGGATA TCAGCAGTAG CAGCGATGTG GAGTTTCGCC TGCTCGGTCA GGATAACTTG
CCCCTTGCCA GCGTCAGTCT CCGGGTGCTG CATATCCCTA AACGAAAACC CCGACAAAGA
GCGGCCTGGA GCCTGTTTTG A
 
Protein sequence
MQHRKVVSAL LLCAIATVAP PAWAIALFEL TPSQCAVDEG DCSVRVTLAW QAEVQQSVCI 
EVLGESEALY CDLPASHTAW SLDISSSSDV EFRLLGQDNL PLASVSLRVL HIPKRKPRQR
AAWSLF