| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0151 |
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| Symbol | |
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| ID | 4602408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 173735 |
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| End bp | 178651 |
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| Gene Length | 4917 bp |
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| Protein Length | 1638 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639779463 |
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| Product | serine protease |
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| Protein accession | YP_926033 |
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| Protein GI | 119773293 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01451] conserved repeat domain
[TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAC TAACTCACGT CTCTCTGATG GTTGCCAGTG CGCTGTACGC CGGTGCCGGT
GCGGCCAGTG GTGGCAATGG TACTGATGCC CCGCAGTGGA ATGCACCACC GGCCGATTAC
GCACCCCAGC CGATTTCTAC ACCCGAATAC GCGGGCATTG CGAATCAGCA AGTTAAAAAG
CAACACAGAA TCTTTACCCC CGAGCAGGAC ATCTCTGGTA TTCAAACCTA TATCGTCCAG
CTTGAAGACA TGCCTGCCGC CGTGTACGAC GGTTCGCTGC AACAGTTTGC GGCCACCAAC
ACTCAGGTGC AGCGCCAGCT GATGGGTAGC AAACCCCTCT CGATCAACGA AGGGGCTTTG
GGTCAGTACA CCCGTTACCT GGTGCAAAAA CGCGAGCAGC TGCTGTCCAA TGCCTTGACA
CAGCAAGGGC TGAATATTCA GGTCGAACAA ACCTTTGCCA TGACACTGAA CGGTTTCAGC
ACCAGAATGA CTCAGGATGA TGCTTTACGC TTGGCAAAAG TACCTGGCAT TAAACACATT
TCCCGCGCCA AAACCCGTCA GCTGTTTACC CATAACACCG CCAGCCAAAC CGGCGCCGAT
CAGGTCTGGA CCAATGCCAG CAATGGCCTT GCGTCCAACA TGGGTGAAGG CATGATAGTG
GGGATTATCG ACACCGGCAT TAACACCGAC CACCCATCCT TTGCCGCCGT TGGTGGTGAT
GGCTATCGCC ACATTAATCC CCTGGGAGAC AAGTACCTCG GTGACTGTGC AACCTTCGAG
GGCCTCTGTA ACGACAAGTT GATTGGTGTG TACTCCTTCC CCGAAGTGAC AGATGCCTAC
AGTGATCCTG TTTTTGCGGA ATCCCGCCCA CCTGTAGGTG AGGATTATCA CAGCCATGGC
TCACATGTGG CTGGGACCGC TGCCGGTAAC ATCATTAAGA ACCAGCCTTT TGTGATTGCA
GAAGGCAAGC CTCAGTCTGA GGGGATCCAC ACCAACTTTG TTTTCCCACA GGTCTCCGGC
ATGGCACCAC ACGCCAATAT CATCTCCTAT CAGGTGTGTC TGCCCGGCAG TTCAGGCGAC
CCTTATGCAG GTTGTCCTGA GGTGGCGATC CTCAAGGCGG TGGAGCAATC GGTCATCGAT
AACGTTGATG TGATTAACCT GTCTTTGGGT GGCATTGAAG AAGACCCCTG GCTCGACCCT
ATGGAGCAGG CCTTCCTGCA CGCCGCTAAA TCAGGCATCT TTGTGGTGAC TGCCGCGGGT
AACAATGGTG ACAGGCTCTA TACTGCCGAC CACTCCTCAC CCTGGCTGAC CAATGTGGGC
GCCCATACGC CAGCTGCAGT GACCGAATAT CAGGATAAAT ATCTGCAGGA TATGCGCGGC
GGTGCAACTG CCGCACCTGA GGCCATGAGC GGTCGTTCGG TGACCTTTGA AGAAGTCAGT
GGTCTTATCG TGCGGGCGCA GGATTATCCC AACCCCAACG AAACCTATGC GTTTAACTGG
GCCAACTGCG ACAAGCCTTA TCCCGCGGGC ACCTTCGATT TGGCAGACAA TCCCGATACT
GCGGATGTGG ATGAAAGTCA GGAGAAGGTG ATAGTGCTGT GTAAGCGCAG CTCGCTGCCA
TTGTACGCCA AGTCACTGAA CGTGGCGGCA GGTGGTGCCG AAGGCATTAT CATCCAGAAT
CAATCGCCCT TTCTGGATAA CTCCGTCACT CCCGATGTAC CCCATGCTAT CCCGGGGATC
CACATCAGCT TTGCCAATGG TCAGAAACTC AACACCTGGC TGAGCACGGG CTCCGGACAT
TTCGGCACCA TCACGGGTAC AGAAATGGCA TTGACCCCTG TCGAAAAAGA AACCATGGCG
GGCTTCTCAT CACGCGGTCC TTCTTACTTT GGCATCGATA CCATGGTGGT GGACATCGCA
GCGCCGGGTG TAGACATCTT TGCCCCGTCC TCTGACGATC AACCCTTTAC CAAAAACCCA
AGATCAGGCC TTTGGACTAC CATGAGCGGT ACCTCGATGG CCAGTCCCCA TGTAGCGGGT
GCTGCGACCC TGTTGCGTCA GTCACATCCA GACTGGTCGC CTATGCAGGT GCAGTCTGCG
CTGATGATGA CCGCCACCAA TCAGCTGGAA AACGGTTCAA TCATTAATCC TTACACCAGC
TATCAGGAGT TATCCGGTTA CCAGGATATG GGTGCCGGCC GCATGAACGT AAACATGGCC
GACAAGGTCG ATTTGACACT GCATGAGGAC ATGGAAGCCC TGGCGATGGC CAACCCAGGC
AATGGCGGCG ATGTGAAAAA GCTTAACACC GCCTACATGG TCGATACGGA TTGCGGTGAC
AGCTGCAGCT TTATGCGTAC CTTTACCGCC GAGCGAGATG GTCATTGGAC GCTGAGCACC
GAAGCCTTTT TGGATGGTTT CGACATCAAG GTGCAACCAG AGAGCTTCTC CCTCAAGGCC
GGTGAGACTC AGTCCATCGT GGTGTCTGTG GTAAACAAGC AGACCACAAG TGCCGTGGAC
TTGGTGTCTT TGTCAGGCAA TCAGGGCCAG GTGTTGGTGA CCTCCTCCAA CCCGGATGCC
CCAGTGTTGG AATTGCCAGT ATGGACCTGG GTAGGGGCCA AAGGTATTCC GAGCCATGTG
ATGGTGGATG CCCACCGTAC ATCAGGCCAA ATGGAAGTGG GACCTTTCGA TACGGCTGAG
GTAAATGATC TCACGACCCG CAGTTATGGT CTGGTCAAAG CCGCTCAGCA CAGTGCGCAC
ATGTTTACCG ACACCACGGG AGGCGATCCC TTTGATTTGG ATGCCGAGGG TAAACTCAAT
AACCACATGA CACTGACCAA TGTGCCCGAC AATTCGCAGG CCTTGTTCAG CCGTGTGGTG
GGTGATGACC ACTCGAGAGT GCTGGTGTTT ATGGGTGAAG ACAGCAACCA GAACGGCTTG
CCGGATCCCG AAGAAATGCT GTGTATGTCC ACCTCCTATA CAGAGGCAAA CTACTGCAGC
ATCCAGCAAC CCAATGCCGG TACTTATTGG ACTGTTTACA TGAGTCTGGC CACTGTGGGT
TATGGCAAGG AAGATTTGGG ACGCGAAATT ACCGTTGCCG AAGCCGTGGT GCCTGCCCTG
GATAACGGTA ACCTGACCGT ATCCGGCGAA AGCAGCATTC CGGGCTATCG CAGCTACCCG
CTGAATTTGA GCTACCGCAT CCCAGAATTG CAGGTTGGCG ATGTGTATTT TGGCGGCTTT
GATCTGGGCA GTGACGGCAA TAATCCCGGA AACCTGGGGT ATGTGCCTGT CACGCTTATC
CAGCGCGATG AAGATGTCAG CCTGACCGCC AGCCATACCC ATGCCAAGCC TGGAGACCTG
GTGGATTTTA CACTTTCTGT CATAGCCAAC AATGATGCAG CAGCCAAGGA CTTTGTCTTC
AATGCCAATT TCCCTGCTGG TCTGCAAATT GTTCCCGAAT CGGTGAAGGC GTCACACGCG
ACACCGGGCA CGCCGATGGT AGAAGACAAC AGCCTCCATC TGGCCGGTGT ACAGGAAAGC
ACCCGTGATG TGCAGCGTAA CTACAAGATC ACCTCCAATC AGGACGATCC ACTCTGTAGT
CTGACTGCGG CCAATTCACC TGAGCCCGGT TATCTGGACC TGCGTCAGCT GGGATGGAGA
ACACTCGAGG GACTCGAAGG TAACTACCGA AATAGCAAGG AATATCTGTT GTCTGATCTG
ATGGCGACCG ACCAGAAGGT GACCTTCCCC TTCTTTGGCA ACAAGTCGTA CGACAGTATC
AAGATAAGCC CTGCCGGTGT GATTTATTTT GGTGCGCGAA ACCTGCCCTA TGCCCACATG
AAAATGCCTG ACGGCTTCAC TGGCTTGCCA GCACCGGAAG ACATGATTGC GCCTCTGTGG
ATTGGTGATA ACCAGGTTGC CCGATATGAC GGCGGTTATG GTCAGTACGA GCTCAATGCC
GGTGTTACGC CAACGTACAC ATACAGCCGT GAGTGGTTGG TACTGGAGTT TGACAATATC
ACCCGCTCCT CAGCGCCTGA GCAGCTGGCC GATTTTGAAA TCTTCATGCG CATGCTGATT
GACCATGAAC CCGGTGAGTA CGAGATGCTG ATTGCCTACG ACAATCTGAA TCTCACCAGC
GGTGATGGCA GTATCGGCTT CAAGAGCTTT GTCGGGCGTA TGCTGGTGGA TGGTGATATT
CCCGTCGACA TCTCCCACGG CGCAGGCTTC GCATTTAACG ATCTCGATGA AAAGCTGAGC
GACAAGCTGG TGCTCTGTCT GGACTATCAG GGGCCTGAGC AATCGAAGTT TGAAGTGAAT
TTCCAGGCCT ATGTCAGCGA GCGGGCGGCC AACTCCGTGC AAAAAGTGGT GCTGGAAAAT
GGCATGGAAG GGGCAGATAC CGAAAGCCTG TCAGTTGAGG TGGCGGTAAG CGGTAACCTG
CAGATGGCAC AGCTGCCGAA CATGCAGGTG GATGAAAACA GCAGCATCAG CTTCGACGTG
ACCTATGCCG ACAGCAATAA GGTGAGCAAC GAAATCAGCC TGGTGGGTGA CCACTTCAGC
TATGAGCTGA GTGGCCACGG TTCTGGCGCT ACTGTGACCC TGACGCCGGA TGCAGATTTT
CACGGTGAAA CAGAAGTGAC GGTCATGGTG CGTGATACTG CCAACATGGC TGATTCAGTA
AGCAGCAGCT TCCTGCTCAG CGTGATGTCA GACGGTGTTG AAAAAGGCTG TACCGACAGT
GGTGCAACCA ACTTCGACCC GAATGCCAAT CAGGATGACG GCAGCTGTAA GTTCCCACCC
AAGCCCGAAG TTGAAGAAAA AACAGAGACT TCATCGGGTG GTGCCCTGGG TTGGTCCATG
TTGTTCTTGG CACTCTTTGG CGCTCTGCGT CAGCAAAGAC GGCGGGTAGC TGCTTAA
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| Protein sequence | MSKLTHVSLM VASALYAGAG AASGGNGTDA PQWNAPPADY APQPISTPEY AGIANQQVKK
QHRIFTPEQD ISGIQTYIVQ LEDMPAAVYD GSLQQFAATN TQVQRQLMGS KPLSINEGAL
GQYTRYLVQK REQLLSNALT QQGLNIQVEQ TFAMTLNGFS TRMTQDDALR LAKVPGIKHI
SRAKTRQLFT HNTASQTGAD QVWTNASNGL ASNMGEGMIV GIIDTGINTD HPSFAAVGGD
GYRHINPLGD KYLGDCATFE GLCNDKLIGV YSFPEVTDAY SDPVFAESRP PVGEDYHSHG
SHVAGTAAGN IIKNQPFVIA EGKPQSEGIH TNFVFPQVSG MAPHANIISY QVCLPGSSGD
PYAGCPEVAI LKAVEQSVID NVDVINLSLG GIEEDPWLDP MEQAFLHAAK SGIFVVTAAG
NNGDRLYTAD HSSPWLTNVG AHTPAAVTEY QDKYLQDMRG GATAAPEAMS GRSVTFEEVS
GLIVRAQDYP NPNETYAFNW ANCDKPYPAG TFDLADNPDT ADVDESQEKV IVLCKRSSLP
LYAKSLNVAA GGAEGIIIQN QSPFLDNSVT PDVPHAIPGI HISFANGQKL NTWLSTGSGH
FGTITGTEMA LTPVEKETMA GFSSRGPSYF GIDTMVVDIA APGVDIFAPS SDDQPFTKNP
RSGLWTTMSG TSMASPHVAG AATLLRQSHP DWSPMQVQSA LMMTATNQLE NGSIINPYTS
YQELSGYQDM GAGRMNVNMA DKVDLTLHED MEALAMANPG NGGDVKKLNT AYMVDTDCGD
SCSFMRTFTA ERDGHWTLST EAFLDGFDIK VQPESFSLKA GETQSIVVSV VNKQTTSAVD
LVSLSGNQGQ VLVTSSNPDA PVLELPVWTW VGAKGIPSHV MVDAHRTSGQ MEVGPFDTAE
VNDLTTRSYG LVKAAQHSAH MFTDTTGGDP FDLDAEGKLN NHMTLTNVPD NSQALFSRVV
GDDHSRVLVF MGEDSNQNGL PDPEEMLCMS TSYTEANYCS IQQPNAGTYW TVYMSLATVG
YGKEDLGREI TVAEAVVPAL DNGNLTVSGE SSIPGYRSYP LNLSYRIPEL QVGDVYFGGF
DLGSDGNNPG NLGYVPVTLI QRDEDVSLTA SHTHAKPGDL VDFTLSVIAN NDAAAKDFVF
NANFPAGLQI VPESVKASHA TPGTPMVEDN SLHLAGVQES TRDVQRNYKI TSNQDDPLCS
LTAANSPEPG YLDLRQLGWR TLEGLEGNYR NSKEYLLSDL MATDQKVTFP FFGNKSYDSI
KISPAGVIYF GARNLPYAHM KMPDGFTGLP APEDMIAPLW IGDNQVARYD GGYGQYELNA
GVTPTYTYSR EWLVLEFDNI TRSSAPEQLA DFEIFMRMLI DHEPGEYEML IAYDNLNLTS
GDGSIGFKSF VGRMLVDGDI PVDISHGAGF AFNDLDEKLS DKLVLCLDYQ GPEQSKFEVN
FQAYVSERAA NSVQKVVLEN GMEGADTESL SVEVAVSGNL QMAQLPNMQV DENSSISFDV
TYADSNKVSN EISLVGDHFS YELSGHGSGA TVTLTPDADF HGETEVTVMV RDTANMADSV
SSSFLLSVMS DGVEKGCTDS GATNFDPNAN QDDGSCKFPP KPEVEEKTET SSGGALGWSM
LFLALFGALR QQRRRVAA
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