Gene Sama_0137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0137 
Symbol 
ID4602394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp153990 
End bp154754 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content57% 
IMG OID639779449 
Productmolybdopterin biosynthesis protein MoeB 
Protein accessionYP_926019 
Protein GI119773279 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID[TIGR02355] molybdopterin synthase sulfurylase MoeB 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG ACATACTCTC TGACACAGAG CTGCTACGCT ACAGTCGCCA GATTTCCATA 
AAATCCATGG ATATAGAGGG TCAGGAAAAG CTCAAACAGG CTCGGGTGCT GGTGATAGGC
GCCGGCGGCC TTGGCTGCGC CGCCGCCCAG TATCTGGGCG TTGCCGGTGT TGGTGCAATG
ACTCTGGTGG ACTTTGACAC TGTGGAGCTG TCGAACCTGC AACGCCAGGT GCTACACCGG
GACAATCGCA TCGGCATGCT CAAGGTGGAA TCGGCCAGGC TGGCTCTCAA TGAGCTTAAT
CCCCATGTGC AGATAAATCC CATTGGCCGG GTACTGGACG ACCCCGAAAT GGATGCGTTG
GTCGCAGACC ATTCCCTGGT GCTGGACTGT ACCGACAATG TGGCGGTGCG TCAGCAACTG
AACCGGGCAT GCTTTGCCCA TAAGGTACCG CTGGTATCGG CCGCGGCGAT TCGCATGGAA
GGCATGATTA CCGTGTTTGA CTATGCCGGA GACAGCCCCT GTTATCAGTG CTTCGCCAGC
CTGTTTGGTG AGCAGCAGCT GACCTGTGTT GAGTCGGGTA TTCTGGCCCC GGTGGTGGGG
TTGATGGGGT GCTTACAGGC AGTTGAGGCC ATTAAATTGA TTGCCGGCAT GGGCAAACCT
TTGCTGGGGC GCCTGCTGAT GGTGGATGCC ATGACGATGG AGATGCGCCA GATGATACTG
CCACGCCAGC CCAATTGCCC TGTTTGCGGT GGTGCCACAG TTTAA
 
Protein sequence
MTDDILSDTE LLRYSRQISI KSMDIEGQEK LKQARVLVIG AGGLGCAAAQ YLGVAGVGAM 
TLVDFDTVEL SNLQRQVLHR DNRIGMLKVE SARLALNELN PHVQINPIGR VLDDPEMDAL
VADHSLVLDC TDNVAVRQQL NRACFAHKVP LVSAAAIRME GMITVFDYAG DSPCYQCFAS
LFGEQQLTCV ESGILAPVVG LMGCLQAVEA IKLIAGMGKP LLGRLLMVDA MTMEMRQMIL
PRQPNCPVCG GATV