Gene Sama_0121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0121 
Symbol 
ID4602378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp135388 
End bp135978 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content55% 
IMG OID639779433 
Productmolybdopterin-guanine dinucleotide biosynthesis protein 
Protein accessionYP_926003 
Protein GI119773263 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0746] Molybdopterin-guanine dinucleotide biosynthesis protein A 
TIGRFAM ID[TIGR02665] molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.7219 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTGC GCATTGATGC CGTCATCCTT GCCGGCGGTC AGGCCCGCCG CATGGGTGGT 
CAGGATAAGG GGCTGGTAGA GCTCCTTGGC AAACCCATGA TTGAACATGC CATTACGCGC
ATTCAACCTC AGGTTAAGGA GATCCTGATC AACGCCAACC GCAATCAAAA CCTGTATGCT
CAGTTTGCTG ACTGTGTATT TGGTGATGAA GACAGCGGCT TTTTGGGACC TCTTGCCGGC
ATGGTAACCG CCATGGGCAA AACCCAGGCC GATCTGCTGT TGGTTGTACC CTGTGACTGC
CCTTGCCTTC CCACTGATTT GGTTGCCAGG ATGGCAGCAG CACTGGAAGC CGAAGCGGCC
GACCTCGCCG TTGCCAGCGA TGGCGAGTAT GAACAACCGG TGGTGATGCT GCTCAAACCA
TCACTGCGCG ATTCCATGAA GGCTTTTTTA GCGGCCGGCG AGCGCAAAAT TGATTTTTGG
TACGCCAAAC ACAAGGTGGC AGTGGTTTCC TTTGCCGACC AGCCCAATGC CTTCGTAAAC
GTCAACACGC CAGAGCAAGT AGAACAACTA TCCAAGGCGC TGACACAGTG A
 
Protein sequence
MSLRIDAVIL AGGQARRMGG QDKGLVELLG KPMIEHAITR IQPQVKEILI NANRNQNLYA 
QFADCVFGDE DSGFLGPLAG MVTAMGKTQA DLLLVVPCDC PCLPTDLVAR MAAALEAEAA
DLAVASDGEY EQPVVMLLKP SLRDSMKAFL AAGERKIDFW YAKHKVAVVS FADQPNAFVN
VNTPEQVEQL SKALTQ