Gene Sama_0118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0118 
Symbol 
ID4602375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp132080 
End bp132517 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content56% 
IMG OID639779430 
Producthypothetical protein 
Protein accessionYP_926000 
Protein GI119773260 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.453663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACTTA AACGCCGTAC CTGGAACAAC ATCATTATCA TCGCCTGCAT CCTGATGGTC 
TCGGTGCTGA CCTTGCTCGA CCAGCGCATG AACAGCCTGC CGGAAGATGC CGCGCCACTC
TTTGATGACT CAACGCCCCT GACTGGACTG CAACTGGACG GTGTCGCACT GGAACGCACC
GATGGCATCT TTGCCTGCGA CAGCCAGGTC AGCAACTGTG ATGATTGGGG TAATGCCTGG
TTGAATCTTA AGGTCTCAGC TCTGTCACAG GCCCCAGGCC AGCCCATGGG GCCGCGGGAG
CTGACTATTC TCATCGGCCA TTTGCCACCA CAAACCTGGT TGCTGTTTGA TGACGGATTT
TTGCAGTCGC CCCAGGGTCA CTGGTACCTT ATTCCTCCCA GCCTGCGTCA GGCACTCGAG
CCCCATTTGT CAGACTAA
 
Protein sequence
MGLKRRTWNN IIIIACILMV SVLTLLDQRM NSLPEDAAPL FDDSTPLTGL QLDGVALERT 
DGIFACDSQV SNCDDWGNAW LNLKVSALSQ APGQPMGPRE LTILIGHLPP QTWLLFDDGF
LQSPQGHWYL IPPSLRQALE PHLSD