| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0105 |
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| Symbol | |
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| ID | 4602362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 118400 |
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| End bp | 119377 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639779417 |
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| Product | hypothetical protein |
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| Protein accession | YP_925987 |
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| Protein GI | 119773247 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00001508 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGACAATCA AATTCAGTGA TATTACTGTG GTGGTACAGG GACCGGTTCA GGCCTATCAG
GGTCGGGATC AGCAAGCCGG TATCACCCAA GTCTGCCTTG ATAGCATCCG CACCCATCTA
CCGGGTGCGC GTATCATACT CTCTACCTGG GAAGGACAGA ACTGCACAGG GCTTGCTCCG
GATCTCTTGC TGCAACACCC GGATCCCGGT GCCAATGTGG TTGCCTACAA TGCTCAGGGT
GAAGCACAAA AACTCAACTT TAACCGTCAG ATAGTCTCTA CCTGTGAGGG CCTGAAGCGG
GTAGAGACGC CCTATGCAGT CAAGTTGAGA TCAGATAACT ACCTGACTGG TCATGGGTTT
GTTACTGCAC TGGAGCAGTT TCCCGCTCGC TGTGACCAGG ACATTCGCTT CACCGAGCCC
GTGGTAGTAA ATACCAGTTA CTTCCGGCGT TATGCCGAAG GTCAGCGGGT CATCATGCAT
CCCAGCGATT TTTTCCATTT CGGGCGCACG GAAGATTTGC TGAAAATCTG GGACTTACCT
CTGTTTGAGG ACCGCCCATT CGACCCGGCT CAGGCCGGCA AAGCCCAGTA CCATGGAGCG
CCGCTTACCT GCCCCCATGC CGAGCAAATC TATTGCGACC TGTGGCTCAG ACGTCTTGAC
GATGGCTTTT TGCCCTTAGC GCACCGCCAT CAGTTTTCGG CAAATCAGGG AGAGCGATGG
GACAGGTTTA TGGCATCCAA CCTGCGGGTG TTGGAGCCGG AGCAATTGGG ACTCGGCTTG
ATTGCTCGGT TTATTCCCAA GGCAAAGCGC CCCAACGAAA TGAGCCACCT CGATTGGCTG
TTGCTTTACC GCCGCTATTG CGATCCCACT TACCCCGCAT CGGCTGTAAA GCTCTTCACC
TCTTTGGGCT GGCGACGCTT GCTTAAAATG CCGTTGAGTT ACCTCAAATT CCGTCTGACT
CAGGGTAAAA AAGCCTGA
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| Protein sequence | MTIKFSDITV VVQGPVQAYQ GRDQQAGITQ VCLDSIRTHL PGARIILSTW EGQNCTGLAP
DLLLQHPDPG ANVVAYNAQG EAQKLNFNRQ IVSTCEGLKR VETPYAVKLR SDNYLTGHGF
VTALEQFPAR CDQDIRFTEP VVVNTSYFRR YAEGQRVIMH PSDFFHFGRT EDLLKIWDLP
LFEDRPFDPA QAGKAQYHGA PLTCPHAEQI YCDLWLRRLD DGFLPLAHRH QFSANQGERW
DRFMASNLRV LEPEQLGLGL IARFIPKAKR PNEMSHLDWL LLYRRYCDPT YPASAVKLFT
SLGWRRLLKM PLSYLKFRLT QGKKA
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