Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0096 |
Symbol | |
ID | 4602353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 109353 |
End bp | 109664 |
Gene Length | 312 bp |
Protein Length | 103 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639779408 |
Product | glpE protein |
Protein accession | YP_925978 |
Protein GI | 119773238 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0607] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00139877 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0140048 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCTT TTAAGCACCT GAGCGTCAAC GAGCTCATTC ATATGCGCAC CGAGCAAGGT ACTGATGTAC AAATTGCCGA TATCCGCGAT CCCCAAAGCT TTGCCAACGG CCATATTGAT GGCGCTGTAA ACCTGAGCAA CGATAACCTG GCCCGTTTTA TCGCCGAATC CGATATGGAT AAGCCACTTG TCGTCGTGTG CTACCACGGT ATCAGCAGCC AGAATGCCGC TGCCTATCTG GTGGAGCAGG GTTTCGATCA GGTGTTCAGC CTCGATGGCG GTTATAGCGC CTGGCATATG GCCAATCTCT GA
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Protein sequence | MSAFKHLSVN ELIHMRTEQG TDVQIADIRD PQSFANGHID GAVNLSNDNL ARFIAESDMD KPLVVVCYHG ISSQNAAAYL VEQGFDQVFS LDGGYSAWHM ANL
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