Gene Sama_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0096 
Symbol 
ID4602353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp109353 
End bp109664 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content52% 
IMG OID639779408 
ProductglpE protein 
Protein accessionYP_925978 
Protein GI119773238 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00139877 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0140048 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCTT TTAAGCACCT GAGCGTCAAC GAGCTCATTC ATATGCGCAC CGAGCAAGGT 
ACTGATGTAC AAATTGCCGA TATCCGCGAT CCCCAAAGCT TTGCCAACGG CCATATTGAT
GGCGCTGTAA ACCTGAGCAA CGATAACCTG GCCCGTTTTA TCGCCGAATC CGATATGGAT
AAGCCACTTG TCGTCGTGTG CTACCACGGT ATCAGCAGCC AGAATGCCGC TGCCTATCTG
GTGGAGCAGG GTTTCGATCA GGTGTTCAGC CTCGATGGCG GTTATAGCGC CTGGCATATG
GCCAATCTCT GA
 
Protein sequence
MSAFKHLSVN ELIHMRTEQG TDVQIADIRD PQSFANGHID GAVNLSNDNL ARFIAESDMD 
KPLVVVCYHG ISSQNAAAYL VEQGFDQVFS LDGGYSAWHM ANL