Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0087 |
Symbol | |
ID | 4602344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 98474 |
End bp | 99745 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639779399 |
Product | amidohydrolase |
Protein accession | YP_925969 |
Protein GI | 119773229 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0161193 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.19517 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA CGCTCTTGTC TGTCACTTTA TGGGCTTTAT GTGTGAATGC TCACGCGCTG ACCCTCATCC ATGCGGGAAG TATCATCGAT GGTGAGGCTG CCAAACCGGT GCGGGAGGCA ACACTGGTAC TGGACGGAAA TCGCATTCAG GGCATCGAAA AAGGCTACCG AGCCCCGGCA GAAGGCGACA CAGTGATAGA TTGGCGCGAT GGCACCCTGA TGCCGGGCTT TATCGATATG CATACCCACC TGACGTTTCA GGGCAGTAAA GACTCTTACC TTGAGCCCTA TACTCTGAAT CCTGCCGATG TTGCCCTGCG TGGTGTGATG TATGGCAAAC GCACCCTGAA TGCCGGTTTT ACCACGGTGC GCGATCTGGG GGATGCCGGG CTCGGCTCTA TTGCCCTTCG AAATGCAATC AACAAAGGCT GGGTACAGGG CCCCCGGATA TTTACCGCCG GTACCAGCAT TGGCACCACG GGCGGACATG CCGACAAGAC AAACGGTCGC AACCAGGAGC TGGTGGGCGA CCCCGGGCCA AAGGAAGGGG TAATCAACGG TCCTGCCGAT GCCTACAAGG CGGTGCGCCA GCGCTATAAA GACGGATCCG ACCTGATAAA GATTACCGCG ACTGGTGGTG TGCTCTCCGT GGCCAAGAGC GGCGAAAATC CGCAATTTAC TGATGAAGAG CTTAAGGCCA TAGTGGCTGC AGCCAAGGAT TACGGCTTTA AAGTGGCAGT GCATGCCCAT GGCAAAGAGG GTATGAAAAG GGCAATTCTG GCCGGGGTGA ACACCATAGA GCACGGCACC TACATGGATG AGGAATTGTT CCCCCTGATG AAAAAACACA ATGTGGCGCT GGTGCCCACC CTGCTGGCGG GAGAGTTTGT GGCCGACAAA GCAAAAATTG ACGGCTATTT CCCGGAAGTT GTCAGGCCCA AGGCGGCGGC AATCGGCCCC AAGATCCAGG GGACCTTTGC CAAGGCATAC AAGGCCGGAG TGACCATCGC CTTCGGTACA GATGCCGGCG TGTATGAGCA TGGACGTAAC GGACGCGAGT TTACCCTGAT GGTGGATGCC GGTATGCCAC CCATGGCCGC CATCCAGTCG GCCACCTCCG TTGCCGCCAG AGTGCTTGGT CAGTCAGACC TGGGTACATT AAAAGCGGGC ATGTTAGCCG ATGTGACCGG AGTAAAAGGA AATCCACTGG AGAATATCGC CTTGTTGGAG GCCGTAGACC TGGTGATTAA AGACGGTACG CGGGTGAAGT AA
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Protein sequence | MKKTLLSVTL WALCVNAHAL TLIHAGSIID GEAAKPVREA TLVLDGNRIQ GIEKGYRAPA EGDTVIDWRD GTLMPGFIDM HTHLTFQGSK DSYLEPYTLN PADVALRGVM YGKRTLNAGF TTVRDLGDAG LGSIALRNAI NKGWVQGPRI FTAGTSIGTT GGHADKTNGR NQELVGDPGP KEGVINGPAD AYKAVRQRYK DGSDLIKITA TGGVLSVAKS GENPQFTDEE LKAIVAAAKD YGFKVAVHAH GKEGMKRAIL AGVNTIEHGT YMDEELFPLM KKHNVALVPT LLAGEFVADK AKIDGYFPEV VRPKAAAIGP KIQGTFAKAY KAGVTIAFGT DAGVYEHGRN GREFTLMVDA GMPPMAAIQS ATSVAARVLG QSDLGTLKAG MLADVTGVKG NPLENIALLE AVDLVIKDGT RVK
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