Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0072 |
Symbol | pbpG |
ID | 4602329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 77895 |
End bp | 78806 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639779384 |
Product | D-alanyl-D-alanine endopeptidase |
Protein accession | YP_925954 |
Protein GI | 119773214 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCCA AATTGTTCAA GTACATCAGC CCTCTGCTGA TGCTCGGCCT GCTCTCGGCG ACCAGTGCTC AGGGCGCGGT AAAATCAGAC GCCAAACCCA CTCAGGAACT GGCTTCATAC AGTGCACTCC TGGTCGATAC CAAAACCAAC GAAGTGCTCT ATGCCAGTAA CCCCCATCAG GTTGTTCCTA TTGCCTCGAT CTCCAAGCTG ATGACTGCCA TGGTGACCCT GGATGCCAAG CTCCCGCTCG GGGAAAAAAT CGCGGTTGAA GTCAAAGACA ACCCCGAGAT GAAAAACGTC GTTTCCCGCA TCCGGCTTGG CAGCACCCTG AGCCGTAAAG AAGCCATGTT GCTCACCCTG ATGTCGTCGG AAAACCGCGC CGCCACCACC CTTGCCCATC ATTACCCCGG AGGATATCAG GCCTTTGTGA AGGCGATGAA TGCCAAGGCC AAGGCATTGG GTATGACCAA CACCCGCTTT GTTGAGCCCA CAGGATTGTC GGTACACAAC GTGTCTACCG CCGCCGATTT GGTGAAGCTG CTCAAGGCCG CGCAGGATTA CCCTCTACTG GGCCAGCTCT CTTCGACACC AAGTAAGTCG GTAACCTTTG GCAAACCCAG ATACAGTTTG GCGTTTTACA ACACCAACCG ACTGGTCAAC AAAGACAATT GGGACATTCG CTTAACCAAA ACCGGTTTCA CCGATGCCGC CGGACACTGC CTGGTGATGT TGACCAAGAT GGCCAAACGG GATGTGGCCT TTGTGGTGCT CGACTCTTTC GGTAAACAAA CCCACCTCGG CGATGCCGGA CGCCTGAAAA AATGGCTCGA AACCGGTAAA GTCAGCCCAC TGCCTGACTC CGCCAAAACT TATAAAGAAC AACGCAAGCG TGAGCGTAAT AACAAGGCAT AA
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Protein sequence | MKSKLFKYIS PLLMLGLLSA TSAQGAVKSD AKPTQELASY SALLVDTKTN EVLYASNPHQ VVPIASISKL MTAMVTLDAK LPLGEKIAVE VKDNPEMKNV VSRIRLGSTL SRKEAMLLTL MSSENRAATT LAHHYPGGYQ AFVKAMNAKA KALGMTNTRF VEPTGLSVHN VSTAADLVKL LKAAQDYPLL GQLSSTPSKS VTFGKPRYSL AFYNTNRLVN KDNWDIRLTK TGFTDAAGHC LVMLTKMAKR DVAFVVLDSF GKQTHLGDAG RLKKWLETGK VSPLPDSAKT YKEQRKRERN NKA
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