Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0021 |
Symbol | |
ID | 4602278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 19768 |
End bp | 20493 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639779330 |
Product | hypothetical protein |
Protein accession | YP_925903 |
Protein GI | 119773163 |
COG category | [R] General function prediction only |
COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00312119 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCTAGTC TTCAGTTAAA TGCCGATGTG GGCGAAGGCT ACCCCTTCGA TGCCGACATT ATCGCGCTGG TAGATGCCGC CAATATCGCC TGTGGTGGCC ACGCGGGTGA CTCAAACAGC ATGCGCGCTA CAGTGAAACT TGCGATTGCC AACGGCTGCC TGATTGGCGC CCATCCGTCA TTCCCCGATA AAGCCAACTT TGGCCGCCAG CCCATGCGTA TGGAAGCCAT TGCGCTGACC ACCAGCCTTA TCGACCAAAT TCAAGCCCTG AAGCAAATTT GCGATGAAGA AGGCGCAACC ATGTTTCACG TGAAACCCCA CGGCGCCCTC TACAATCAGG CAGCGTTCGA TAAAGAACTG GCCTCATGCC TTATTGAGGC GATACAGGCC GTCGACGCCA AGCTGGTGCT CATGGGCTTA GCAGCAAGCC CACTGCTGCA ATGGGCCCGT GAGGCAGGCC TTCGGGTGCA GGCAGAGGCC TTTGCCGACC GCCGCTACGA AGCGGACGCC ACCCTGGTGT CGAGGCAACA ACCGGGGGCA GTGATCCACA ACCAAGCCGA AGCGCTGGCA CAGGTGCAGG CGTTAATGTC AGGCAGCCTC ACCAGTATTG ATGGCGCCCG CCTCAGGCTT AGGGCCGACA CTCTGTGCCT GCACGGTGAC AATCCCGAGG CGTTGCAGTT TGCCCGCCGC ATACGGGCAT TGCTGGAGAC GAGCCATGCT GACTGA
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Protein sequence | MSSLQLNADV GEGYPFDADI IALVDAANIA CGGHAGDSNS MRATVKLAIA NGCLIGAHPS FPDKANFGRQ PMRMEAIALT TSLIDQIQAL KQICDEEGAT MFHVKPHGAL YNQAAFDKEL ASCLIEAIQA VDAKLVLMGL AASPLLQWAR EAGLRVQAEA FADRRYEADA TLVSRQQPGA VIHNQAEALA QVQALMSGSL TSIDGARLRL RADTLCLHGD NPEALQFARR IRALLETSHA D
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