Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0011 |
Symbol | rnpA |
ID | 4602268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 9802 |
End bp | 10158 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639779320 |
Product | ribonuclease P |
Protein accession | YP_925893 |
Protein GI | 119773153 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0594] RNase P protein component |
TIGRFAM ID | [TIGR00188] ribonuclease P protein component, eubacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000676804 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000546181 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACTAGCT ACACCTTTAC GCGGGAGTTA CGTTTGTTAA CTCCCGCGCA ATTTCAAGCT GTTTTCACCA ATCCTGTCAA AGCATCTTCT GCTGAAATCA CTTTGCTTGC TACTCCCAAC ACTCAGGAAC ATCCTCGAGT GGGTTTAACC GTGCCCAAAA AGCAGGTTAA ACGCGCCCAT GACCGCAACC GGGTTAAACG GGTTATTCGG GAAAGCTTCA GAATGCATCA ACACGACCTG CCTTCATTGG ACATAGTTGT GTTGGTTCGC AAAGGGGTTA TGGATTTGGA GAATCCCGAA CTTCACAAGC TGGTAGATAA GCTATGGCGC AAACTCAGTC GCCGTTTCAA TGGCTAG
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Protein sequence | MTSYTFTREL RLLTPAQFQA VFTNPVKASS AEITLLATPN TQEHPRVGLT VPKKQVKRAH DRNRVKRVIR ESFRMHQHDL PSLDIVVLVR KGVMDLENPE LHKLVDKLWR KLSRRFNG
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